RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ATP8B4Q8TF62 1192 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 HIST1H2ACQ93077 130 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 HPDLQ96IR7 371 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 NSL1Q96IY1 281 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 LRR1Q96L50 414 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 SGK494Q96LW2 274 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 DEFB118Q96PH6 123 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 NEURL2Q9BR09 285 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 MRPL13Q9BYD1 178 aaKnown RBP3.83□□□□□ -1.8
VPS13D-207ENST00000476169 PKIBQ9C010 78 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 A4GALTQ9NPC4 353 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 SLC38A7Q9NVC3 462 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 TBC1D13Q9NVG8 400 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 PLEK2Q9NYT0 353 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 KCNS2Q9ULS6 477 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 PLCL2Q9UPR0 1127 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 OR10H1Q9Y4A9 318 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 R4GN57 208 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 SNAPC4Q5SXM2 1469 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 ABCC8Q09428 1581 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 DNMBPQ6XZF7 1577 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 KIF21AQ7Z4S6 1674 aa3.83□□□□□ -1.8
VPS13D-207ENST00000476169 NPC1L1Q9UHC9 1359 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 IL16Q14005 1332 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 PDS5AQ29RF7 1337 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 HELTA6NFD8 242 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 MFSD2BA6NFX1 497 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 L7N2F9 121 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 KRT86O43790 486 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 KIF5CO60282 957 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 SNNO75324 88 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 WBP4O75554 376 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 PRKRAO75569 313 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CLDN14O95500 239 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ANP32DO95626 131 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 APOHP02749 345 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 MT-ND1P03886 318 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ANXA8P13928 327 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 EPHA2P29317 976 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 AXLP30530 894 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 SLC6A8P48029 635 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 PGGT1BP53609 377 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 LIMK2P53671 638 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CDH11P55287 796 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 MECOMQ03112 1051 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 FUT7Q11130 342 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 MSLNQ13421 630 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 NFATC2Q13469 925 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CEACAM7Q14002 265 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 KRT81Q14533 505 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 EXOSC7Q15024 291 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 P2RY14Q15391 338 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CALCRLQ16602 461 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF311Q5JNZ3 666 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ANXA8L1Q5VT79 327 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 LIPJQ5W064 366 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 TTC23Q5W5X9 447 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 C8orf82Q6P1X6 216 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 NIPAL3Q6P499 406 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 FAM122CQ6P4D5 195 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 METAP1DQ6UB28 335 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CBLN3Q6UW01 205 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 TMEM64Q6YI46 380 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 OTUD6AQ7L8S5 288 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CPEB2Q7Z5Q1 589 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 FAM228AQ86W67 206 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ZDHHC17Q8IUH5 632 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ADHFE1Q8IWW8 467 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 PGBD5Q8N414 524 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 DCLK2Q8N568 766 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 OR1J1Q8NGS3 322 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 GOLGA5Q8TBA6 731 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 TRMT10AQ8TBZ6 339 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ASB5Q8WWX0 329 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 BPIFA2Q96DR5 249 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF274Q96GC6 653 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 NPAS2Q99743 824 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 AGPAT1Q99943 283 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 RTP3Q9BQQ7 232 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 WWP1Q9H0M0 922 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 RAVER2Q9HCJ3 691 aaKnown RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 GDAP2Q9NXN4 497 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 P2RX2Q9UBL9 471 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ZDHHC2Q9UIJ5 367 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 PSME2Q9UL46 239 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF490Q9ULM2 529 aaPredicted RBP3.82□□□□□ -1.8
VPS13D-207ENST00000476169 MYO6Q9UM54 1294 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 AP4B1Q9Y6B7 739 aa3.82□□□□□ -1.8
VPS13D-207ENST00000476169 CLSPNQ9HAW4 1339 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 A0A075B6Q4 140 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 A0A0G2JNG1 304 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ZCWPW2A0A1B0GU75 182 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ARHGEF35A5YM69 484 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 PCP4L1A6NKN8 68 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF716A6NP11 495 aa3.81□□□□□ -1.8
VPS13D-207ENST00000476169 ZNF732B4DXR9 585 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms