RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 C1GALT1Q9NS00 363 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 PDP1Q9P0J1 537 aaPredicted RBP6.57□□□□□ -1.36
UBR4-212ENST00000475973 SPASTQ9UBP0 616 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 FTSJ1Q9UET6 329 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 CORO2BQ9UQ03 480 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 C2orf16Q68DN1 1984 aa6.57□□□□□ -1.36
UBR4-212ENST00000475973 ANAPC1Q9H1A4 1944 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 A0A0U1RQS6 177 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ZAR1LA6NP61 321 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 GABRR3A8MPY1 467 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 MAGEB17A8MXT2 336 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 CBX4O00257 560 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 TOR1BO14657 336 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 FPGTO14772 594 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 FFAR3O14843 346 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 SCAMP2O15127 329 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 KPNA5O15131 536 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 GPR42O15529 346 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 DYRK3O43781 588 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 LILRB5O75023 590 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 UGT2B17O75795 530 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 CLDN7O95471 211 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 LGI1O95970 557 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 SRPRAP08240 638 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 ADRA2AP08913 450 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ALPIP09923 528 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ADORA3P0DMS8 318 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 CHRNB1P11230 501 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 FUT4P22083 530 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 NR4A1P22736 598 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 GADD45AP24522 165 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 CNR2P34972 360 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 HNF4AP41235 474 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 XCR1P46094 333 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ASMTP46597 345 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 CXCL12P48061 93 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 GSSP48637 474 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RGS6P49758 472 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 EIF2B2P49770 351 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 PNLIPRP1P54315 467 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 UGT2B15P54855 530 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RHOAP61586 193 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 SNRPGP62308 76 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 OLR1P78380 273 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RHAGQ02094 409 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 PTSQ03393 145 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RUNX3Q13761 415 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 DOC2BQ14184 412 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 PDGFRLQ15198 375 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 MICAQ29983 383 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 PTCHD3Q3KNS1 767 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 SAMD5Q5TGI4 173 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ANXA8L1Q5VT79 327 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 GRHL2Q6ISB3 625 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ZCCHC8Q6NZY4 707 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 TSSK4Q6SA08 328 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 FAM151BQ6UXP7 276 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 UNC5DQ6UXZ4 953 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ZNF367Q7RTV3 350 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 PAGE2Q7Z2X7 111 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 VTCN1Q7Z7D3 282 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 DSG4Q86SJ6 1040 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RNF130Q86XS8 419 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 LIX1LQ8IVB5 337 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 PAF1Q8N7H5 531 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 HJURPQ8NCD3 748 aaPredicted RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 ZNF540Q8NDQ6 660 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 OR56A3Q8NH54 315 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 MCFD2Q8NI22 146 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 FIBINQ8TAL6 211 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 WFDC5Q8TCV5 224 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 MYDGFQ969H8 173 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ULK4Q96C45 1275 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RSPRY1Q96DX4 576 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ZHX1-C8orf76Q96EF9 292 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 ZFYVE19Q96K21 471 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 SNX18Q96RF0 628 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 P2RY13Q9BPV8 354 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 COPS4Q9BT78 406 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 BHLHE41Q9C0J9 482 aaPredicted RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 RIBC2Q9H4K1 309 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 RUBCNLQ9H714 662 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 REEP1Q9H902 201 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 GKN1Q9NS71 199 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 KRT84Q9NSB2 600 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 TDP1Q9NUW8 608 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 DNAJC11Q9NVH1 559 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 MRPS18AQ9NVS2 196 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 VPS29Q9UBQ0 182 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 AASSQ9UDR5 926 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 MBD1Q9UIS9 605 aaPredicted RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 ICKQ9UPZ9 632 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 HS3ST2Q9Y278 367 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 POFUT2Q9Y2G5 429 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 SAMHD1Q9Y3Z3 626 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 ANGPTL3Q9Y5C1 460 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 PEX16Q9Y5Y5 336 aa6.56□□□□□ -1.36
UBR4-212ENST00000475973 CFAP20Q9Y6A4 193 aaKnown RBP6.56□□□□□ -1.36
UBR4-212ENST00000475973 SLC5A10A0PJK1 596 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms