RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 METTL2AQ96IZ6 378 aaKnown RBP17.13■□□□□ 0.33
ATG4B-217ENST00000475693 CCDC74BQ96LY2 380 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 C10orf90Q96M02 699 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 QRFPRQ96P65 431 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 FTSJ1Q9UET6 329 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 ASB4Q9Y574 426 aa17.13■□□□□ 0.33
ATG4B-217ENST00000475693 FAM227AF5H4B4 570 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 FURINP09958 794 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 ACPPP15309 386 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 ALOX12P18054 663 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 RELAQ04206 551 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 SYT16Q17RD7 645 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 AASDHQ4L235 1098 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-217ENST00000475693 PHF19Q5T6S3 580 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 CSF3RQ99062 836 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 TBCDQ9BTW9 1192 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 REEP4Q9H6H4 257 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 WDR41Q9HAD4 459 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 PLCL2Q9UPR0 1127 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-217ENST00000475693 FREM2Q5SZK8 3169 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 OR2W5A6NFC9 320 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 FXYD1O00168 92 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 FLRT2O43155 660 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 NELFEP18615 380 aaKnown RBP17.12■□□□□ 0.33
ATG4B-217ENST00000475693 MAT1AQ00266 395 aaKnown RBP17.12■□□□□ 0.33
ATG4B-217ENST00000475693 SLC9A5Q14940 896 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 PRTGQ2VWP7 1150 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 CPTPQ5TA50 214 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 NDUFAF5Q5TEU4 345 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 FAM156AQ8NDB6 213 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 KLHL6Q8WZ60 621 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 GTF2H4Q92759 462 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 THAP11Q96EK4 314 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 SLC41A2Q96JW4 573 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 GFM1Q96RP9 751 aaKnown RBP17.12■□□□□ 0.33
ATG4B-217ENST00000475693 CDRT15Q96T59 188 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 CD180Q99467 661 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 RBCK1Q9BYM8 510 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 COPS7BQ9H9Q2 264 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-217ENST00000475693 MYNNQ9NPC7 610 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 PCDHGA7Q9Y5G6 932 aa17.12■□□□□ 0.33
ATG4B-217ENST00000475693 SCN2BO60939 215 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 RDH16O75452 317 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 GSTM2P28161 218 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 NFYCQ13952 458 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 CCNIQ14094 377 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 MAPKAPK3Q16644 382 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 D2HGDHQ8N465 521 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 EXOSC8Q96B26 276 aaKnown RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 TESCQ96BS2 214 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 AURKBQ96GD4 344 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 PIF1Q9H611 641 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 SERHLQ9NQF3 203 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 DHCR7Q9UBM7 475 aaKnown RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 MAU2Q9Y6X3 613 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 KIF26BQ2KJY2 2108 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 SMIM31A0A1B0GVY4 71 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 FOXS1O43638 330 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 CPSF4O95639 269 aaKnown RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 IL6P05231 212 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 ABCB1P08183 1280 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 ZCCHC18P0CG32 403 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 C8orf89P0DMQ9 161 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 TCN1P20061 433 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 KIR3DL1P43629 444 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 ASMTP46597 345 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 SELPLGQ14242 412 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 CSRP2Q16527 193 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 CNPY1Q3B7I2 92 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 RABL3Q5HYI8 236 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 MRM1Q6IN84 353 aaKnown RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 DLEU7Q6UYE1 221 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 ARHGAP22Q7Z5H3 698 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 GPR180Q86V85 440 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 TMEM126BQ8IUX1 230 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 OR4N5Q8IXE1 308 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 FAM47BQ8NA70 645 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 GLB1L3Q8NCI6 653 aaPredicted RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 LRRC58Q96CX6 371 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 DUSP26Q9BV47 211 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 ZNF768Q9H5H4 540 aaKnown RBP17.11■□□□□ 0.33
ATG4B-217ENST00000475693 SLAMF7Q9NQ25 335 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 OCIAD1Q9NX40 245 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 VAPAQ9P0L0 249 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 NEUROG3Q9Y4Z2 214 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 PCDHGB2Q9Y5G2 931 aa17.11■□□□□ 0.33
ATG4B-217ENST00000475693 HYKKA2RU49 373 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 H3BMH7 237 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 PDLIM1O00151 329 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 ZSCAN9O15535 394 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 SRPX2O60687 465 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 CBFA2T3O75081 653 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 OR2B3O76000 313 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 AIFM1O95831 613 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 ALAS2P22557 587 aa17.1■□□□□ 0.33
ATG4B-217ENST00000475693 DUSP3P51452 185 aaPredicted RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 HNRNPFP52597 415 aaKnown RBP17.1■□□□□ 0.33
ATG4B-217ENST00000475693 MTTPP55157 894 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms