RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 IKZF1Q13422 519 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ANGPT1Q15389 498 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 WSCD2Q2TBF2 565 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 GCNT6Q5T4J0 391 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 UBE2R2Q712K3 238 aaPredicted RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 GLCCI1Q86VQ1 547 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 C9orf62Q8N4C0 152 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 OR4M2Q8NGB6 313 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 NACC2Q96BF6 587 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 UPRTQ96BW1 309 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 C11orf24Q96F05 449 aaPredicted RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 PPP1R3EQ9H7J1 279 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 IL26Q9NPH9 171 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 CRLS1Q9UJA2 301 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 BRCA2P51587 3418 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 FAM240BA0A1B0GVZ2 78 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ORC5O43913 435 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ETFAP13804 333 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ARSBP15848 533 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 RHCEP18577 417 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 APEX1P27695 318 aaKnown RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 CCND3P30281 292 aaPredicted RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 SDC2P34741 201 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ASMTP46597 345 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 LRRC74AQ0VAA2 488 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 MRPL28Q13084 256 aaKnown RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 CRB2Q5IJ48 1285 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 C22orf42Q6IC83 251 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 SDE2Q6IQ49 451 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 METAP1DQ6UB28 335 aaPredicted RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 FAM92BQ6ZTR7 304 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ADGRG2Q8IZP9 1017 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 Q8N402 240 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 TTC9BQ8N6N2 239 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 METTL2AQ96IZ6 378 aaKnown RBP16.95■□□□□ 0.3
CCM2-207ENST00000475551 KCTD7Q96MP8 289 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 C11orf16Q9NQ32 467 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 DNAJC11Q9NVH1 559 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 DNAJC27Q9NZQ0 273 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 CLCA3PQ9Y6N3 262 aa16.95■□□□□ 0.3
CCM2-207ENST00000475551 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 SMLR1H3BR10 107 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 LYRM1O43325 122 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 CTSHP09668 335 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 OSMP13725 252 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 PTBP1P26599 531 aaKnown RBP eCLIP16.94■□□□□ 0.39e-9■■■■■ 35.7
CCM2-207ENST00000475551 ABATP80404 500 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 ZNF91Q05481 1191 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 CHIT1Q13231 466 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 ZNF177Q13360 481 aaPredicted RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 ILKQ13418 452 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 COX20Q5RI15 118 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 FAM205BPQ63HN1 556 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 ZNF730Q6ZMV8 503 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 OR4A15Q8NGL6 344 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 PXYLP1Q8TE99 480 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 SLC6A18Q96N87 628 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 TMEM38AQ9H6F2 299 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 SYNDIG1Q9H7V2 258 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 ZFYVE1Q9HBF4 777 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 SPATA6Q9NWH7 488 aaPredicted RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 NLKQ9UBE8 527 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 LHX3Q9UBR4 397 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 AFF4Q9UHB7 1163 aaKnown RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 SLC22A14Q9Y267 594 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 RNASET2O00584 256 aaKnown RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 ADAP00813 363 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 IFNA14P01570 189 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 PDGFAP04085 211 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 IDSP22304 550 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 IRS1P35568 1242 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 PRMT2P55345 433 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 ACSM2AQ08AH3 577 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 GANABQ14697 944 aaKnown RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 ACSM2BQ68CK6 577 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 NFKBIDQ8NI38 313 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 KATNB1Q9BVA0 655 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 TSSK6Q9BXA6 273 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 REV1Q9UBZ9 1251 aa16.94■□□□□ 0.3
CCM2-207ENST00000475551 ELF5Q9UKW6 265 aaPredicted RBP16.94■□□□□ 0.3
CCM2-207ENST00000475551 TRAV19A0A0A6YYK7 116 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 PRAMEF33A0A0G2JMD5 474 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 A0A0U1RQF3 1178 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 PRAMEF10O60809 474 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 SLC22A5O76082 557 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 C8GP07360 202 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 HIST1H2AGP0C0S8 130 aaPredicted RBP16.93■□□□□ 0.3
CCM2-207ENST00000475551 AKR1A1P14550 325 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 HIST1H2ADP20671 130 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 SLC11A2P49281 568 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 STK19P49842 368 aaPredicted RBP16.93■□□□□ 0.3
CCM2-207ENST00000475551 GPR33Q49SQ1 333 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 CYP27C1Q4G0S4 372 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 ARMC12Q5T9G4 340 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 LIPJQ5W064 366 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 C12orf73Q69YU5 71 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 ATAD1Q8NBU5 361 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 OR8H1Q8NGG4 311 aa16.93■□□□□ 0.3
CCM2-207ENST00000475551 OR52N2Q8NGI0 321 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms