RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 B3GNT7Q8NFL0 401 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 EPS8L3Q8TE67 593 aaKnown RBP22.46■■□□□ 1.19
CPNE1-223ENST00000475146 GRHL3Q8TE85 626 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 FRG2BQ96QU4 278 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 NPAS2Q99743 824 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 C1QTNF3Q9BXJ4 246 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 CDCP1Q9H5V8 836 aa22.46■■□□□ 1.19
CPNE1-223ENST00000475146 MYO18BQ8IUG5 2567 aa22.45■■□□□ 1.19
CPNE1-223ENST00000475146 TRBV11-1A0A0K0K1C0 115 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 BLACEA4D250 179 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 SYNDIG1LA6NDD5 238 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 GABRR3A8MPY1 467 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 FOXO6A8MYZ6 492 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 DLX3O60479 287 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 LDB3O75112 727 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 SUPT7LO94864 414 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ETHE1O95571 254 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ATP5F1P24539 256 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ST13P50502 369 aaKnown RBP22.45■■□□□ 1.18
CPNE1-223ENST00000475146 VSNL1P62760 191 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 GGTA1PQ4G0N0 100 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 SGO1Q5FBB7 561 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 RPUSD3Q6P087 351 aaKnown RBP22.45■■□□□ 1.18
CPNE1-223ENST00000475146 RPS19BP1Q86WX3 136 aaKnown RBP22.45■■□□□ 1.18
CPNE1-223ENST00000475146 LGI4Q8N135 537 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ZCCHC7Q8N3Z6 543 aaKnown RBP22.45■■□□□ 1.18
CPNE1-223ENST00000475146 TRPC4APQ8TEL6 797 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 SERPINI1Q99574 410 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 UTP23Q9BRU9 249 aaKnown RBP22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ALOXE3Q9BYJ1 711 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 DEFB126Q9BYW3 111 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ELOVL6Q9H5J4 265 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 ANKRD10Q9NXR5 420 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 DCDC2Q9UHG0 476 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 PHF11Q9UIL8 331 aa22.45■■□□□ 1.18
CPNE1-223ENST00000475146 TENM4Q6N022 2769 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 PPP6CO00743 305 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 PRAMEF2O60811 474 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 GLRA3O75311 464 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 SLU7O95391 586 aaKnown RBP22.44■■□□□ 1.18
CPNE1-223ENST00000475146 HSD17B3P37058 310 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 CLCN2P51788 898 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 ARFIP1P53367 373 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 ID2Q02363 134 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 OC90Q02509 493 aaPredicted RBP22.44■■□□□ 1.18
CPNE1-223ENST00000475146 CLCQ05315 142 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 TUBA3CQ13748 450 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 ELAVL1Q15717 326 aaKnown RBP22.44■■□□□ 1.18
CPNE1-223ENST00000475146 LETMD1Q6P1Q0 360 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 TUBA3EQ6PEY2 450 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 GPR180Q86V85 440 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 TDRPQ86YL5 185 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 SLC22A9Q8IVM8 553 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 TMEM237Q96Q45 408 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 MS4A12Q9NXJ0 267 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 PSD3Q9NYI0 1048 aa22.44■■□□□ 1.18
CPNE1-223ENST00000475146 A0A1B0GTL3 188 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 EEDO75530 441 aaKnown RBP22.43■■□□□ 1.18
CPNE1-223ENST00000475146 BSGP35613 385 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 HNRNPH2P55795 449 aaKnown RBP22.43■■□□□ 1.18
CPNE1-223ENST00000475146 TNFRSF17Q02223 184 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 SERTAD2Q14140 314 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 INAQ16352 499 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 UNC50Q53HI1 259 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 ZNF678Q5SXM1 525 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 C10orf62Q5T681 223 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-223ENST00000475146 CYP20A1Q6UW02 462 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 NUDT13Q86X67 352 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 TMEM132CQ8N3T6 1108 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 APCDD1LQ8NCL9 501 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 NCLNQ969V3 563 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 VMP1Q96GC9 406 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 ZNF717Q9BY31 904 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-223ENST00000475146 LYARQ9NX58 379 aaKnown RBP22.43■■□□□ 1.18
CPNE1-223ENST00000475146 PPT2Q9UMR5 302 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 CLCA3PQ9Y6N3 262 aa22.43■■□□□ 1.18
CPNE1-223ENST00000475146 A0A0A6YYD5 115 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 OR4F21O95013 312 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 SEMA3DO95025 777 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 TNNI3P19429 210 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 TLX1P31314 330 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 CD96P40200 585 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 BUD31P41223 144 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 PRKAA2P54646 552 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 ELOAQ14241 798 aaKnown RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 OR1C1Q15619 314 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 ZNF766Q5HY98 468 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 C18orf63Q68DL7 685 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 BCORP1Q8N888 145 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 THAP3Q8WTV1 239 aaPredicted RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 FAR1Q8WVX9 515 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 SELENOMQ8WWX9 145 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 BARD1Q99728 777 aaKnown RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 RPF2Q9H7B2 306 aaKnown RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 DDX31Q9H8H2 851 aaKnown RBP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 VTI1BQ9UEU0 232 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.42■■□□□ 1.18
CPNE1-223ENST00000475146 TRPS1Q9UHF7 1281 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 SNX6Q9UNH7 406 aa22.42■■□□□ 1.18
CPNE1-223ENST00000475146 ATG4BQ9Y4P1 393 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms