RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 OR5M9Q8NGP3 310 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 OR5M3Q8NGP4 307 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 PTPMT1Q8WUK0 201 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-205ENST00000474996 DAZLQ92904 295 aaKnown RBP13.32□□□□□ -0.28
COL2A1-205ENST00000474996 ESAMQ96AP7 390 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 F2RL3Q96RI0 385 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 CAPS2Q9BXY5 557 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 ALOXE3Q9BYJ1 711 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-205ENST00000474996 RHOJQ9H4E5 214 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 ZDHHC11Q9H8X9 412 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 POPDC3Q9HBV1 291 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 PRDM7Q9NQW5 492 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 DNAJC11Q9NVH1 559 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 ZNF490Q9ULM2 529 aaPredicted RBP13.32□□□□□ -0.28
COL2A1-205ENST00000474996 LIPGQ9Y5X9 500 aa13.32□□□□□ -0.28
COL2A1-205ENST00000474996 SYNDIG1LA6NDD5 238 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 CLGNO14967 610 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TP73O15350 636 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 LDB3O75112 727 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 GLSO94925 669 aaPredicted RBP13.31□□□□□ -0.28
COL2A1-205ENST00000474996 SEC31AO94979 1220 aaKnown RBP13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TCP1P17987 556 aaKnown RBP13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TNNI3P19429 210 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 CD22P20273 847 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 CNR1P21554 472 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 GGT5P36269 586 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 HSPA7P48741 367 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 SLC12A2P55011 1212 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 DOC2AQ14183 400 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 RCN2Q14257 317 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 EFTUD2Q15029 972 aaKnown RBP eCLIP13.31□□□□□ -0.28
COL2A1-205ENST00000474996 RTL4Q6ZR62 310 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 GK5Q6ZS86 529 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 CAPN12Q6ZSI9 719 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 ACAD11Q709F0 780 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TCAIMQ8N3R3 496 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 SNX31Q8N9S9 440 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 OR14A16Q8NHC5 309 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 SCYL1Q96KG9 808 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 SMC6Q96SB8 1091 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 FAM173AQ9BQD7 235 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 MCMBPQ9BTE3 642 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TRIM31Q9BZY9 425 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 DERL2Q9GZP9 239 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 EHD1Q9H4M9 534 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 CAB39LQ9H9S4 337 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TRMT1Q9NXH9 659 aaKnown RBP13.31□□□□□ -0.28
COL2A1-205ENST00000474996 TNFRSF10DQ9UBN6 386 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 VTI1BQ9UEU0 232 aa13.31□□□□□ -0.28
COL2A1-205ENST00000474996 MTORP42345 2549 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 C17orf105B2RV13 164 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-205ENST00000474996 STK16O75716 305 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 WISP3O95389 354 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-205ENST00000474996 HOXD4P09016 255 aaPredicted RBP13.3□□□□□ -0.28
COL2A1-205ENST00000474996 MAGEA5P43359 124 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 RNF4P78317 190 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 ID2Q02363 134 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 TGM3Q08188 693 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 NDUFAF5Q5TEU4 345 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 ZNF585AQ6P3V2 769 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 FAM47EQ6ZV65 393 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 UBE3DQ7Z6J8 389 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 TMEM200AQ86VY9 491 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 GPSM1Q86YR5 675 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 FAM109AQ8N4B1 249 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 TMEM251Q8N6I4 163 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 OR10Q1Q8NGQ4 319 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 SLC2A12Q8TD20 617 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 PTCD3Q96EY7 689 aaKnown RBP13.3□□□□□ -0.28
COL2A1-205ENST00000474996 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 CNOT10Q9H9A5 744 aaKnown RBP13.3□□□□□ -0.28
COL2A1-205ENST00000474996 SMYD2Q9NRG4 433 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 NSMCE4AQ9NXX6 385 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 MTO1Q9Y2Z2 717 aaKnown RBP13.3□□□□□ -0.28
COL2A1-205ENST00000474996 ZFHX3Q15911 3703 aa13.3□□□□□ -0.28
COL2A1-205ENST00000474996 OR14I1A6ND48 311 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 FIGNL2A6NMB9 653 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 E7ESA3 106 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 RTCAO00442 366 aaKnown RBP13.29□□□□□ -0.28
COL2A1-205ENST00000474996 BCKDKO14874 412 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 PHGDHO43175 533 aaKnown RBP13.29□□□□□ -0.28
COL2A1-205ENST00000474996 ETHE1O95571 254 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 IGHG3P01860 377 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 CELA3AP09093 270 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 CCDC166P0CW27 439 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 CCL3P10147 92 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 ACVR2AP27037 513 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 KCNC1P48547 511 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 DNASE1L1P49184 302 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 POU4F1Q01851 419 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 SERTAD2Q14140 314 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 OR4D1Q15615 310 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 PDK4Q16654 411 aa13.29□□□□□ -0.28
COL2A1-205ENST00000474996 SULT1C3Q6IMI6 304 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms