RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 HAS2Q92819 552 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 TMEM237Q96Q45 408 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 NTMT1Q9BV86 223 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 SLC29A3Q9BZD2 475 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 CLDN16Q9Y5I7 305 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 SPACA6W5XKT8 324 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 TENM4Q6N022 2769 aa14.97□□□□□ -0.01
ITGB1-210ENST00000474568 TRAV17A0A0B4J275 112 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 TRBV11-1A0A0K0K1C0 115 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 TLDC2A0PJX2 215 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 CTNSO60931 367 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 OR4F21O95013 312 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 SCELO95171 688 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 ATP5F1P24539 256 aaPredicted RBP14.96□□□□□ -0.01
ITGB1-210ENST00000474568 HNRNPH2P55795 449 aaKnown RBP14.96□□□□□ -0.01
ITGB1-210ENST00000474568 CLCQ05315 142 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 IFT88Q13099 833 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 ZNF678Q5SXM1 525 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 FRG2Q64ET8 278 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 C18orf63Q68DL7 685 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 H3F3CQ6NXT2 135 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 LETMD1Q6P1Q0 360 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 GRHL3Q8TE85 626 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 FRG2BQ96QU4 278 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 ALOXE3Q9BYJ1 711 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 C12orf65Q9H3J6 166 aaKnown RBP14.96□□□□□ -0.01
ITGB1-210ENST00000474568 ELOVL6Q9H5J4 265 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 FARSBQ9NSD9 589 aaKnown RBP14.96□□□□□ -0.01
ITGB1-210ENST00000474568 ABI3Q9P2A4 366 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 EMCNQ9ULC0 261 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 TSC22D4Q9Y3Q8 395 aa14.96□□□□□ -0.01
ITGB1-210ENST00000474568 ARHGAP10A1A4S6 786 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 GABRR3A8MPY1 467 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 ESPNB1AK53 854 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 TMPRSS11DO60235 418 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 OTCP00480 354 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 TNNI3P19429 210 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 BSGP35613 385 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 HERVK_113P63132 956 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 OC90Q02509 493 aaPredicted RBP14.95□□□□□ -0.02
ITGB1-210ENST00000474568 TUBA3CQ13748 450 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 EIF2S3LQ2VIR3 472 aaKnown RBP14.95□□□□□ -0.02
ITGB1-210ENST00000474568 TCHHL1Q5QJ38 904 aaPredicted RBP14.95□□□□□ -0.02
ITGB1-210ENST00000474568 TUBA3EQ6PEY2 450 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 GPR180Q86V85 440 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 RPS19BP1Q86WX3 136 aaKnown RBP14.95□□□□□ -0.02
ITGB1-210ENST00000474568 C4orf33Q8N1A6 199 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 SUN3Q8TAQ9 357 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 DOK4Q8TEW6 326 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 NCLNQ969V3 563 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 HBEGFQ99075 208 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 UTP23Q9BRU9 249 aaKnown RBP14.95□□□□□ -0.02
ITGB1-210ENST00000474568 ERVK-6Q9BXR3 956 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 ZNF717Q9BY31 904 aaPredicted RBP14.95□□□□□ -0.02
ITGB1-210ENST00000474568 HES7Q9BYE0 225 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 DEFB126Q9BYW3 111 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 ADAP2Q9NPF8 381 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 KLHL1Q9NR64 748 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 ATG4BQ9Y4P1 393 aa14.95□□□□□ -0.02
ITGB1-210ENST00000474568 RELNP78509 3460 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 GLOD5A6NK44 160 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 WASHC1A8K0Z3 465 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 FOXE1O00358 373 aaPredicted RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 FGF17O60258 216 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 PRAMEF2O60811 474 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 GLRA3O75311 464 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 PDYNP01213 254 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 GSTA1P08263 222 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 TPP2P29144 1249 aaPredicted RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 CD96P40200 585 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 PMP22Q01453 160 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 CUL3Q13618 768 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 OR1C1Q15619 314 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 ZNF468Q5VIY5 522 aaPredicted RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 CYP20A1Q6UW02 462 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 FAM180AQ6UWF9 173 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 LCA5Q86VQ0 697 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 NUDT13Q86X67 352 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 TDRPQ86YL5 185 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 ZCCHC7Q8N3Z6 543 aaKnown RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 CCNYL1Q8N7R7 359 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 CDYL2Q8N8U2 506 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 CCDC63Q8NA47 563 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 APCDD1LQ8NCL9 501 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 B3GNT7Q8NFL0 401 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 PRR7Q8TB68 274 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 SELENOMQ8WWX9 145 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.94□□□□□ -0.024e-6■■■■□ 21.6
ITGB1-210ENST00000474568 UCN3Q969E3 161 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 ANKRD9Q96BM1 317 aaPredicted RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 SIGLEC12Q96PQ1 595 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 SERPINI1Q99574 410 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 C1QTNF3Q9BXJ4 246 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 MRPL1Q9BYD6 325 aaKnown RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 RNF32Q9H0A6 362 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 RPF2Q9H7B2 306 aaKnown RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 LIN28AQ9H9Z2 209 aaKnown RBP14.94□□□□□ -0.02
ITGB1-210ENST00000474568 AGPAT4Q9NRZ5 378 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 DCDC2Q9UHG0 476 aa14.94□□□□□ -0.02
ITGB1-210ENST00000474568 ZNF225Q9UK10 706 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms