RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 NFKBIL1Q9UBC1 381 aaPredicted RBP3.03□□□□□ -1.92
SSB-210ENST00000474273 CFDP1Q9UEE9 299 aaPredicted RBP3.03□□□□□ -1.92
SSB-210ENST00000474273 FBXO7Q9Y3I1 522 aa3.03□□□□□ -1.92
SSB-210ENST00000474273 ILVBLA1L0T0 632 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 NEDD8-MDP1E9PL57 170 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 ZNF253O75346 499 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 PPP2R1AP30153 589 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 DRD3P35462 400 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 NPBWR1P48145 328 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 IGLV3-21P80748 117 aaPredicted RBP3.02□□□□□ -1.93
SSB-210ENST00000474273 GPR50Q13585 617 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 PCK2Q16822 640 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 ZNF776Q68DI1 518 aaPredicted RBP3.02□□□□□ -1.93
SSB-210ENST00000474273 REP15Q6BDI9 236 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 RFWD3Q6PCD5 774 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 RAPH1Q70E73 1250 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 SPATA19Q7Z5L4 167 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 SLFN11Q7Z7L1 901 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 CCDC89Q8N998 374 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 CLEC1AQ8NC01 280 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 RNF149Q8NC42 400 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 ZNRF1Q8ND25 227 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 SEPT8Q92599 483 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 S100A14Q9HCY8 104 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.02□□□□□ -1.93
SSB-210ENST00000474273 MED17Q9NVC6 651 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 NYAP2Q9P242 653 aa3.02□□□□□ -1.93
SSB-210ENST00000474273 PFASO15067 1338 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ARHGEF37A1IGU5 675 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 OR5H15A6NDH6 313 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ANKDD1BA6NHY2 528 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 FOXI3A8MTJ6 420 aaPredicted RBP3.01□□□□□ -1.93
SSB-210ENST00000474273 E2F3O00716 465 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 CLN5O75503 358 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 LYNP07948 512 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 TSPY3P0CV98 308 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 TSPY8P0CW00 308 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 SKILP12757 684 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ACKR3P25106 362 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ADARP55265 1226 aaKnown RBP3.01□□□□□ -1.93
SSB-210ENST00000474273 RFTN1Q14699 578 aaPredicted RBP3.01□□□□□ -1.93
SSB-210ENST00000474273 LTB4RQ15722 352 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ZNF600Q6ZNG1 722 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 SAMD12Q8N8I0 201 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 SMYD1Q8NB12 490 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 BADQ92934 168 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ANAPC11Q9NYG5 84 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 ARMCX1Q9P291 453 aa3.01□□□□□ -1.93
SSB-210ENST00000474273 COL16A1Q07092 1604 aaPredicted RBP3.01□□□□□ -1.93
SSB-210ENST00000474273 FAM205AQ6ZU69 1335 aa3□□□□□ -1.93
SSB-210ENST00000474273 TRAV9-2A0A087WT02 112 aa3□□□□□ -1.93
SSB-210ENST00000474273 CCDC162PA2VCL2 907 aa3□□□□□ -1.93
SSB-210ENST00000474273 M0R296 226 aa3□□□□□ -1.93
SSB-210ENST00000474273 B4GAT1O43505 415 aa3□□□□□ -1.93
SSB-210ENST00000474273 SELENOFO60613 162 aa3□□□□□ -1.93
SSB-210ENST00000474273 DKC1O60832 514 aaKnown RBP eCLIP3□□□□□ -1.93
SSB-210ENST00000474273 CALCAP01258 141 aa3□□□□□ -1.93
SSB-210ENST00000474273 APOA4P06727 396 aa3□□□□□ -1.93
SSB-210ENST00000474273 ZFYP08048 801 aaPredicted RBP3□□□□□ -1.93
SSB-210ENST00000474273 ZNF19P17023 458 aa3□□□□□ -1.93
SSB-210ENST00000474273 PRKCIP41743 596 aa3□□□□□ -1.93
SSB-210ENST00000474273 ALDH3B1P43353 468 aa3□□□□□ -1.93
SSB-210ENST00000474273 FHITP49789 147 aa3□□□□□ -1.93
SSB-210ENST00000474273 IST1P53990 364 aa3□□□□□ -1.93
SSB-210ENST00000474273 FOLH1Q04609 750 aa3□□□□□ -1.93
SSB-210ENST00000474273 CRMP1Q14194 572 aa3□□□□□ -1.93
SSB-210ENST00000474273 ABRAXAS2Q15018 415 aa3□□□□□ -1.93
SSB-210ENST00000474273 TTC31Q49AM3 519 aaPredicted RBP3□□□□□ -1.93
SSB-210ENST00000474273 PM20D1Q6GTS8 502 aa3□□□□□ -1.93
SSB-210ENST00000474273 ALKBH5Q6P6C2 394 aaKnown RBP3□□□□□ -1.93
SSB-210ENST00000474273 PAMR1Q6UXH9 720 aa3□□□□□ -1.93
SSB-210ENST00000474273 CACUL1Q86Y37 369 aa3□□□□□ -1.93
SSB-210ENST00000474273 CCDC71Q8IV32 467 aaPredicted RBP3□□□□□ -1.93
SSB-210ENST00000474273 PRR22Q8IZ63 422 aa3□□□□□ -1.93
SSB-210ENST00000474273 TRAF3IP1Q8TDR0 691 aaPredicted RBP3□□□□□ -1.93
SSB-210ENST00000474273 GPR148Q8TDV2 347 aa3□□□□□ -1.93
SSB-210ENST00000474273 CDHR1Q96JP9 859 aa3□□□□□ -1.93
SSB-210ENST00000474273 INTS14Q96SY0 518 aa3□□□□□ -1.93
SSB-210ENST00000474273 BAG1Q99933 345 aaPredicted RBP3□□□□□ -1.93
SSB-210ENST00000474273 TEX13BQ9BXU2 312 aa3□□□□□ -1.93
SSB-210ENST00000474273 LSG1Q9H089 658 aaKnown RBP3□□□□□ -1.93
SSB-210ENST00000474273 NT5DC2Q9H857 520 aa3□□□□□ -1.93
SSB-210ENST00000474273 ZNF319Q9P2F9 582 aa3□□□□□ -1.93
SSB-210ENST00000474273 IKZF3Q9UKT9 509 aa3□□□□□ -1.93
SSB-210ENST00000474273 TMED7Q9Y3B3 224 aa3□□□□□ -1.93
SSB-210ENST00000474273 ZNF724A8MTY0 619 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 HMGB1P1B2RPK0 211 aaPredicted RBP2.99□□□□□ -1.93
SSB-210ENST00000474273 KBTBD13C9JR72 458 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 TIMM44O43615 452 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 SIX3O95343 332 aaPredicted RBP2.99□□□□□ -1.93
SSB-210ENST00000474273 PDGFBP01127 241 aaPredicted RBP2.99□□□□□ -1.93
SSB-210ENST00000474273 RLN1P04808 185 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 OR9G9P0C7N8 305 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 ATP6V1B1P15313 513 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 SOAT1P35610 550 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 ID1P41134 155 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 HMGCS2P54868 508 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 FKBP1BP68106 108 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 LYPLAL1Q5VWZ2 237 aa2.99□□□□□ -1.93
SSB-210ENST00000474273 CASC4Q6P4E1 433 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms