RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 KCTD4Q8WVF5 259 aa18.89■□□□□ 0.61
APP-215ENST00000474136 ANKRD49Q8WVL7 239 aa18.89■□□□□ 0.61
APP-215ENST00000474136 NXNL1Q96CM4 212 aa18.89■□□□□ 0.61
APP-215ENST00000474136 LINGO1Q96FE5 620 aa18.89■□□□□ 0.61
APP-215ENST00000474136 FOXC2Q99958 501 aa18.89■□□□□ 0.61
APP-215ENST00000474136 SYCE1LA8MT33 242 aa18.88■□□□□ 0.61
APP-215ENST00000474136 TFECO14948 347 aaPredicted RBP18.88■□□□□ 0.61
APP-215ENST00000474136 HOXD4P09016 255 aaPredicted RBP18.88■□□□□ 0.61
APP-215ENST00000474136 MEOX1P50221 254 aa18.88■□□□□ 0.61
APP-215ENST00000474136 NR0B1P51843 470 aaKnown RBP18.88■□□□□ 0.61
APP-215ENST00000474136 ABATP80404 500 aa18.88■□□□□ 0.61
APP-215ENST00000474136 IRF9Q00978 393 aa18.88■□□□□ 0.61
APP-215ENST00000474136 MYBPHQ13203 477 aa18.88■□□□□ 0.61
APP-215ENST00000474136 CES4AQ5XG92 561 aa18.88■□□□□ 0.61
APP-215ENST00000474136 TMEM211Q6ICI0 200 aa18.88■□□□□ 0.61
APP-215ENST00000474136 TMEM214Q6NUQ4 689 aaKnown RBP18.88■□□□□ 0.61
APP-215ENST00000474136 LGI4Q8N135 537 aa18.88■□□□□ 0.61
APP-215ENST00000474136 PLPP5Q8NEB5 264 aa18.88■□□□□ 0.61
APP-215ENST00000474136 MCOLN3Q8TDD5 553 aa18.88■□□□□ 0.61
APP-215ENST00000474136 ELP5Q8TE02 316 aa18.88■□□□□ 0.61
APP-215ENST00000474136 RND1Q92730 232 aa18.88■□□□□ 0.61
APP-215ENST00000474136 KIAA1191Q96A73 305 aa18.88■□□□□ 0.61
APP-215ENST00000474136 SCYL1Q96KG9 808 aa18.88■□□□□ 0.61
APP-215ENST00000474136 SLC30A3Q99726 388 aa18.88■□□□□ 0.61
APP-215ENST00000474136 MRPL46Q9H2W6 279 aaKnown RBP18.88■□□□□ 0.61
APP-215ENST00000474136 LANCL2Q9NS86 450 aa18.88■□□□□ 0.61
APP-215ENST00000474136 KCNN3Q9UGI6 736 aa18.88■□□□□ 0.61
APP-215ENST00000474136 TMCO1Q9UM00 188 aa18.88■□□□□ 0.61
APP-215ENST00000474136 ZNF860A6NHJ4 632 aa18.87■□□□□ 0.61
APP-215ENST00000474136 SLC16A5O15375 505 aa18.87■□□□□ 0.61
APP-215ENST00000474136 HS6ST1O60243 411 aa18.87■□□□□ 0.61
APP-215ENST00000474136 C8GP07360 202 aa18.87■□□□□ 0.61
APP-215ENST00000474136 CD1DP15813 335 aa18.87■□□□□ 0.61
APP-215ENST00000474136 CYB561P49447 251 aa18.87■□□□□ 0.61
APP-215ENST00000474136 OR4D2P58180 307 aa18.87■□□□□ 0.61
APP-215ENST00000474136 CMPK2Q5EBM0 449 aa18.87■□□□□ 0.61
APP-215ENST00000474136 ADAMTSL2Q86TH1 951 aa18.87■□□□□ 0.61
APP-215ENST00000474136 LRRC56Q8IYG6 542 aaPredicted RBP18.87■□□□□ 0.61
APP-215ENST00000474136 PLD6Q8N2A8 252 aaKnown RBP18.87■□□□□ 0.61
APP-215ENST00000474136 KCT2Q8NC54 265 aa18.87■□□□□ 0.61
APP-215ENST00000474136 CHDHQ8NE62 594 aaPredicted RBP18.87■□□□□ 0.61
APP-215ENST00000474136 SREK1Q8WXA9 508 aaKnown RBP18.87■□□□□ 0.61
APP-215ENST00000474136 CCDC126Q96EE4 140 aa18.87■□□□□ 0.61
APP-215ENST00000474136 PEX11GQ96HA9 241 aa18.87■□□□□ 0.61
APP-215ENST00000474136 GPR78Q96P69 363 aa18.87■□□□□ 0.61
APP-215ENST00000474136 TRIM54Q9BYV2 358 aa18.87■□□□□ 0.61
APP-215ENST00000474136 LIME1Q9H400 295 aa18.87■□□□□ 0.61
APP-215ENST00000474136 TMEM216Q9P0N5 145 aa18.87■□□□□ 0.61
APP-215ENST00000474136 SCN3AQ9NY46 2000 aa18.87■□□□□ 0.61
APP-215ENST00000474136 PABPN1LA6NDY0 278 aaKnown RBP18.86■□□□□ 0.61
APP-215ENST00000474136 PLIN3O60664 434 aa18.86■□□□□ 0.61
APP-215ENST00000474136 PDE9AO76083 593 aa18.86■□□□□ 0.61
APP-215ENST00000474136 CATP04040 527 aaKnown RBP18.86■□□□□ 0.61
APP-215ENST00000474136 ENO2P09104 434 aaPredicted RBP18.86■□□□□ 0.61
APP-215ENST00000474136 DRD2P14416 443 aa18.86■□□□□ 0.61
APP-215ENST00000474136 TFEBP19484 476 aa18.86■□□□□ 0.61
APP-215ENST00000474136 TAC1P20366 129 aa18.86■□□□□ 0.61
APP-215ENST00000474136 HSD17B2P37059 387 aa18.86■□□□□ 0.61
APP-215ENST00000474136 FOXD4Q12950 439 aaPredicted RBP18.86■□□□□ 0.61
APP-215ENST00000474136 SP140Q13342 867 aa18.86■□□□□ 0.61
APP-215ENST00000474136 THEMIS2Q5TEJ8 643 aa18.86■□□□□ 0.61
APP-215ENST00000474136 HHATQ5VTY9 493 aa18.86■□□□□ 0.61
APP-215ENST00000474136 ISCA2Q86U28 154 aa18.86■□□□□ 0.61
APP-215ENST00000474136 SULF2Q8IWU5 870 aa18.86■□□□□ 0.61
APP-215ENST00000474136 CCDC63Q8NA47 563 aa18.86■□□□□ 0.61
APP-215ENST00000474136 OR5T3Q8NGG3 340 aa18.86■□□□□ 0.61
APP-215ENST00000474136 SEC16BQ96JE7 1060 aa18.86■□□□□ 0.61
APP-215ENST00000474136 TRIM45Q9H8W5 580 aaPredicted RBP18.86■□□□□ 0.61
APP-215ENST00000474136 ANKHQ9HCJ1 492 aa18.86■□□□□ 0.61
APP-215ENST00000474136 ZNF839A8K0R7 811 aa18.85■□□□□ 0.61
APP-215ENST00000474136 MAGEB17A8MXT2 336 aa18.85■□□□□ 0.61
APP-215ENST00000474136 PGGT1BP53609 377 aa18.85■□□□□ 0.61
APP-215ENST00000474136 NUP107P57740 925 aa18.85■□□□□ 0.61
APP-215ENST00000474136 MLF1P58340 268 aa18.85■□□□□ 0.61
APP-215ENST00000474136 FOLH1Q04609 750 aa18.85■□□□□ 0.61
APP-215ENST00000474136 PMPCAQ10713 525 aa18.85■□□□□ 0.61
APP-215ENST00000474136 ASPHQ12797 758 aa18.85■□□□□ 0.61
APP-215ENST00000474136 DLG1Q12959 904 aa18.85■□□□□ 0.61
APP-215ENST00000474136 CEBPEQ15744 281 aa18.85■□□□□ 0.61
APP-215ENST00000474136 EMC4Q5J8M3 183 aa18.85■□□□□ 0.61
APP-215ENST00000474136 CYHR1Q6ZMK1 362 aa18.85■□□□□ 0.61
APP-215ENST00000474136 ANKRD42Q8N9B4 389 aa18.85■□□□□ 0.61
APP-215ENST00000474136 POGLUT1Q8NBL1 392 aa18.85■□□□□ 0.61
APP-215ENST00000474136 TMEM125Q96AQ2 219 aa18.85■□□□□ 0.61
APP-215ENST00000474136 FAM111AQ96PZ2 611 aa18.85■□□□□ 0.61
APP-215ENST00000474136 TP63Q9H3D4 680 aaPredicted RBP18.85■□□□□ 0.61
APP-215ENST00000474136 INTS9Q9NV88 658 aaKnown RBP18.85■□□□□ 0.61
APP-215ENST00000474136 DNAJB12Q9NXW2 375 aaKnown RBP18.85■□□□□ 0.61
APP-215ENST00000474136 NAALAD2Q9Y3Q0 740 aa18.85■□□□□ 0.61
APP-215ENST00000474136 KCNE1BA0A087WTH5 132 aa18.84■□□□□ 0.61
APP-215ENST00000474136 BIRC5O15392 142 aa18.84■□□□□ 0.61
APP-215ENST00000474136 ZBTB14O43829 449 aa18.84■□□□□ 0.61
APP-215ENST00000474136 KERAO60938 352 aa18.84■□□□□ 0.61
APP-215ENST00000474136 DNAJB6O75190 326 aa18.84■□□□□ 0.61
APP-215ENST00000474136 PROCP04070 461 aa18.84■□□□□ 0.61
APP-215ENST00000474136 CPA3P15088 417 aa18.84■□□□□ 0.61
APP-215ENST00000474136 HLCSP50747 726 aa18.84■□□□□ 0.61
APP-215ENST00000474136 PRKAA2P54646 552 aa18.84■□□□□ 0.61
APP-215ENST00000474136 RPS15AP62244 130 aaKnown RBP18.84■□□□□ 0.61
APP-215ENST00000474136 TECRLQ5HYJ1 363 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms