RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 MYO1DO94832 1006 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
VAMP4-203ENST00000474047 OR4F21O95013 312 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 F10P00742 488 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 NUDT17P0C025 328 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 HNRNPFP52597 415 aaKnown RBP13.32□□□□□ -0.28
VAMP4-203ENST00000474047 ARFIP1P53367 373 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 ZNF169Q14929 603 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-203ENST00000474047 MEP1AQ16819 746 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 GGTA1PQ4G0N0 100 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 CFAP157Q5JU67 520 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 FCRLBQ6BAA4 426 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 GPRIN3Q6ZVF9 776 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 GPR180Q86V85 440 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 AMER2Q8N7J2 671 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 OR1N1Q8NGS0 311 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 TMEM237Q96Q45 408 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 ALOXE3Q9BYJ1 711 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 ROPN1BQ9BZX4 212 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-203ENST00000474047 WDR41Q9HAD4 459 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 ROPN1Q9HAT0 212 aaPredicted RBP13.32□□□□□ -0.28
VAMP4-203ENST00000474047 TRPS1Q9UHF7 1281 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 VPS4AQ9UN37 437 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 CNTRLQ7Z7A1 2325 aa13.32□□□□□ -0.28
VAMP4-203ENST00000474047 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 SAGE2PA6NJ88 616 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 PPP6CO00743 305 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 SCELO95171 688 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 KRT6AP02538 564 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 KRT6BP04259 564 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 TUBBP07437 444 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 HMOX2P30519 316 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 SOX11P35716 441 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 BUD31P41223 144 aaPredicted RBP13.31□□□□□ -0.28
VAMP4-203ENST00000474047 KRT6CP48668 564 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 FOXK1P85037 733 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 SERTAD2Q14140 314 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 ACER2Q5QJU3 275 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 LETMD1Q6P1Q0 360 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 ZYG11AQ6WRX3 759 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 PAGE2Q7Z2X7 111 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 NUDT13Q86X67 352 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 SCUBE1Q8IWY4 988 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 ZCCHC7Q8N3Z6 543 aaKnown RBP13.31□□□□□ -0.28
VAMP4-203ENST00000474047 CISD2Q8N5K1 135 aaKnown RBP13.31□□□□□ -0.28
VAMP4-203ENST00000474047 CDYL2Q8N8U2 506 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 Q8NA96 180 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 CATSPER1Q8NEC5 780 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 MYRIPQ8NFW9 859 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 HAS2Q92819 552 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 L3HYPDHQ96EM0 354 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 LYARQ9NX58 379 aaKnown RBP13.31□□□□□ -0.28
VAMP4-203ENST00000474047 MID2Q9UJV3 735 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 SLC12A4Q9UP95 1085 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 CSAG2Q9Y5P2 127 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 COPG1Q9Y678 874 aaKnown RBP13.31□□□□□ -0.28
VAMP4-203ENST00000474047 CLCA3PQ9Y6N3 262 aa13.31□□□□□ -0.28
VAMP4-203ENST00000474047 MYOCOSA0A1B0GUC4 107 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 LDB3O75112 727 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CRCPO75575 148 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 WDPCPO95876 746 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 PDYNP01213 254 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 PROCP04070 461 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CPA3P15088 417 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CUZD1Q86UP6 607 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 TMEM132CQ8N3T6 1108 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 RDH11Q8TC12 318 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 ZNF382Q96SR6 550 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 DEFB126Q9BYW3 111 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 SLC29A3Q9BZD2 475 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CLMPQ9H6B4 373 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 RPF2Q9H7B2 306 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 DDX31Q9H8H2 851 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 ADAP2Q9NPF8 381 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 EMCNQ9ULC0 261 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 PPT2Q9UMR5 302 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 TRAV17A0A0B4J275 112 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 PLIN3O60664 434 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 ULK1O75385 1050 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 EEDO75530 441 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 SEMA3DO95025 777 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 ETHE1O95571 254 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 FAM58BPP0C7Q3 252 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 COX7A2P14406 83 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 PPP2R1BP30154 601 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 BSGP35613 385 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CLCN2P51788 898 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 PKNOX1P55347 436 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 NAA20P61599 178 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 ID2Q02363 134 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 LCP2Q13094 533 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 TERF2Q15554 542 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CCNYL2Q5T2Q4 361 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 H3F3CQ6NXT2 135 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 SH2D5Q6ZV89 423 aa13.3□□□□□ -0.28
VAMP4-203ENST00000474047 RPS19BP1Q86WX3 136 aaKnown RBP13.3□□□□□ -0.28
VAMP4-203ENST00000474047 CRLF3Q8IUI8 442 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms