RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 INTS11Q5TA45 600 aaKnown RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 ERICH5Q6P6B1 374 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 SPRED1Q7Z699 444 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 OR52N2Q8NGI0 321 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 ZFPM2Q8WW38 1151 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 TMBIM1Q969X1 311 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 MAPKAP1Q9BPZ7 522 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 EPS8L2Q9H6S3 715 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 OLAHQ9NV23 265 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 RAB26Q9ULW5 256 aa17.07■□□□□ 0.32
VARS2-206ENST00000473916 FAF1Q9UNN5 650 aaPredicted RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 WBP11Q9Y2W2 641 aaKnown RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 MRPS2Q9Y399 296 aaKnown RBP17.07■□□□□ 0.32
VARS2-206ENST00000473916 ZNF23P17027 643 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 IL1RNP18510 177 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 FRKP42685 505 aaPredicted RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 CXCL12P48061 93 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 BLMHQ13867 455 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 MAP7Q14244 749 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 HS3ST5Q8IZT8 346 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 CAMKK1Q8N5S9 505 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 TRIML2Q8N7C3 387 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 UTP15Q8TED0 518 aaKnown RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 TM4SF19Q96DZ7 209 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 PYURFQ96I23 114 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 CD320Q9NPF0 282 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 OR5K3A6NET4 321 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 PLOD2O00469 737 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 DENRO43583 198 aaKnown RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 CTSBP07858 339 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 LYNP07948 512 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 C8orf89P0DMQ9 161 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 STXBP1P61764 594 aaKnown RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 TRA2BP62995 288 aaKnown RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 VAC14Q08AM6 782 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 SPIDRQ14159 915 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 DEFB133Q30KQ1 61 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 PRSS41Q7RTY9 318 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 DCP2Q8IU60 420 aaKnown RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 MAFAQ8NHW3 353 aaPredicted RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 NFKBIDQ8NI38 313 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 BAHD1Q8TBE0 780 aaPredicted RBP17.06■□□□□ 0.32
VARS2-206ENST00000473916 NT5CQ8TCD5 201 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 GLIPR2Q9H4G4 154 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 C1GALT1Q9NS00 363 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 UCKL1Q9NWZ5 548 aa17.06■□□□□ 0.32
VARS2-206ENST00000473916 TMEM229AB2RXF0 380 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 H0YGG7 62 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 ERAL1O75616 437 aaKnown RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 PRSS23O95084 383 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 RASAL1O95294 804 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 CST1P01037 141 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 OPN1SWP03999 348 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 EIF2S1P05198 315 aaKnown RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 UQCRC2P22695 453 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 PCGF2P35227 344 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 RPS9P46781 194 aaKnown RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 ARF3P61204 181 aaPredicted RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 OTUD3Q5T2D3 398 aaPredicted RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 TMTC4Q5T4D3 741 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 GCNT6Q5T4J0 391 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 ANKRD34AQ69YU3 496 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 TMEM179BQ7Z7N9 219 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 ZCCHC7Q8N3Z6 543 aaKnown RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 ARL14Q8N4G2 192 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 FAM174AQ8TBP5 190 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 OR5P2Q8WZ92 322 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 GAL3ST3Q96A11 431 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 CNRIP1Q96F85 164 aaPredicted RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 NR1H4Q96RI1 486 aaPredicted RBP17.05■□□□□ 0.32
VARS2-206ENST00000473916 C9orf16Q9BUW7 83 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 STARD5Q9NSY2 213 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 ABCG2Q9UNQ0 655 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
VARS2-206ENST00000473916 A0A0J9YY10 115 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ZNF860A6NHJ4 632 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 DEAF1O75398 565 aaPredicted RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 DIRAS1O95057 198 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SLC35G6P0C7Q6 338 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ST6GAL1P15907 406 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 NXPH1P58417 271 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 OLR1P78380 273 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 RGS1Q08116 209 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 VEZF1Q14119 521 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ELOCQ15369 112 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 DEFB110Q30KQ9 67 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 DEFB134Q4QY38 66 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 NHSL2Q5HYW2 709 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 TNFAIP8L2Q6P589 184 aaPredicted RBP17.04■□□□□ 0.32
VARS2-206ENST00000473916 TMEM154Q6P9G4 183 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 UGT2A3Q6UWM9 527 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 C11orf65Q8NCR3 313 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 KLHL6Q8WZ60 621 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 HSH2DQ96JZ2 352 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 SPACA7Q96KW9 195 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 AMDHD1Q96NU7 426 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ZFYVE21Q9BQ24 234 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 BDH2Q9BUT1 245 aa17.04■□□□□ 0.32
VARS2-206ENST00000473916 ASPSCR1Q9BZE9 553 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms