RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FAR2Q96K12 515 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 OR1F2PQ96R84 312 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 SERINC2Q96SA4 455 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 TBCDQ9BTW9 1192 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 NPLQ9BXD5 320 aaPredicted RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 SHCBP1LQ9BZQ2 653 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 ZNF700Q9H0M5 742 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 ZNF160Q9HCG1 818 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 ZNF71Q9NQZ8 489 aaPredicted RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 INTS9Q9NV88 658 aaKnown RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 ADGRE2Q9UHX3 823 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 STK38LQ9Y2H1 464 aa12.32□□□□□ -0.44
TPM3-216ENST00000473036 UTP20O75691 2785 aaKnown RBP12.32□□□□□ -0.44
TPM3-216ENST00000473036 A0A0A6YYD5 115 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 MYOCOSA0A1B0GUC4 107 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 H3BQF6 201 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 B3GALT2O43825 422 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 ESRRBO95718 433 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 GBAP04062 536 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 CHRNGP07510 517 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 DHRS4L1P0CG22 281 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 C8orf89P0DMQ9 161 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 NEFHP12036 1026 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 RNH1P13489 461 aaKnown RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 ACPPP15309 386 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 GRK2P25098 689 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 PPP2R1BP30154 601 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 SERPINB5P36952 375 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 SOX8P57073 446 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 RAB38P57729 211 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 GALNT1Q10472 559 aaPredicted RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 KLRB1Q12918 225 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 ABRAXAS2Q15018 415 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 LACTB2Q53H82 288 aaPredicted RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 MFSD4BQ5TF39 518 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 MRM1Q6IN84 353 aaKnown RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 SCIMPQ6UWF3 145 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 CHSY3Q70JA7 882 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 NDUFAF7Q7L592 441 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 SCUBE1Q8IWY4 988 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 PARP9Q8IXQ6 854 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 PSMF1Q92530 271 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 MIB2Q96AX9 1013 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 RGMAQ96B86 450 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 REPS1Q96D71 796 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 IP6K3Q96PC2 410 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 MRPL1Q9BYD6 325 aaKnown RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 ZNF552Q9H707 407 aaPredicted RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 DDX31Q9H8H2 851 aaKnown RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 CLK4Q9HAZ1 481 aaKnown RBP12.31□□□□□ -0.44
TPM3-216ENST00000473036 MID1IP1Q9NPA3 183 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 TP53TG5Q9Y2B4 290 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 ATG4BQ9Y4P1 393 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 ASB4Q9Y574 426 aa12.31□□□□□ -0.44
TPM3-216ENST00000473036 CPAMD8Q8IZJ3 1885 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 PEX12O00623 359 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 TRIM13O60858 407 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 SEC24DO94855 1032 aaPredicted RBP12.3□□□□□ -0.44
TPM3-216ENST00000473036 MLYCDO95822 493 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 HPP00738 406 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 BPGMP07738 259 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 IL10P22301 178 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 TPP2P29144 1249 aaPredicted RBP12.3□□□□□ -0.44
TPM3-216ENST00000473036 SSR2P43308 183 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 PKNOX1P55347 436 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 IFT88Q13099 833 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 SLAMF1Q13291 335 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 NSDHLQ15738 373 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 IGFBP7Q16270 282 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 ATG16L1Q676U5 607 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 C18orf63Q68DL7 685 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 CLEC6AQ6EIG7 209 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 NIPAL1Q6NVV3 410 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 CPEB2Q7Z5Q1 589 aaKnown RBP12.3□□□□□ -0.44
TPM3-216ENST00000473036 NUDCD3Q8IVD9 361 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 METTL4Q8N3J2 472 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 ZCCHC7Q8N3Z6 543 aaKnown RBP12.3□□□□□ -0.44
TPM3-216ENST00000473036 GALNT16Q8N428 558 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 PPP1R14CQ8TAE6 165 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 METTL6Q8TCB7 284 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 SELENOMQ8WWX9 145 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 MAGEB10Q96LZ2 347 aaPredicted RBP12.3□□□□□ -0.44
TPM3-216ENST00000473036 FER1L6-AS2Q96M78 137 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 PTCHD1Q96NR3 888 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 TRMOQ9BU70 441 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 ACPTQ9BZG2 426 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 ELOVL6Q9H5J4 265 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 ZNF395Q9H8N7 513 aaPredicted RBP12.3□□□□□ -0.44
TPM3-216ENST00000473036 LYRM4Q9HD34 91 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 FAM53CQ9NYF3 392 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 FBXW2Q9UKT8 454 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 PTGDR2Q9Y5Y4 395 aa12.3□□□□□ -0.44
TPM3-216ENST00000473036 A0A1W2PR48 441 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 A0A1W2PS29 197 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 ENO4A6NNW6 628 aa12.29□□□□□ -0.44
TPM3-216ENST00000473036 TMEM233B4DJY2 109 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms