RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 NRDCO43847 1150 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 PRKNO60260 465 aaPredicted RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 IL18BPO95998 194 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CCL3P10147 92 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 TNNI3P19429 210 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 SAT1P21673 171 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CTSSP25774 331 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 MGAT1P26572 445 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 RPL22P35268 128 aaKnown RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 SARNPP82979 210 aaKnown RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CCZ1BP86790 482 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CCZ1P86791 482 aaPredicted RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CTBP1Q13363 440 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 OASLQ15646 514 aaKnown RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 DUPD1Q68J44 220 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CASC4Q6P4E1 433 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 PODNL1Q6PEZ8 512 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CYHR1Q6ZMK1 362 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 GABPB2Q8TAK5 448 aaPredicted RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 CD200R1Q8TD46 325 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 SLC5A11Q8WWX8 675 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 ATL1Q8WXF7 558 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 TMEM158Q8WZ71 300 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 OR8D2Q9GZM6 311 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 RYDENQ9NUL5 291 aaKnown RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 SYBUQ9NX95 663 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 PDE10AQ9Y233 779 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 DYRK1BQ9Y463 629 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 FBN1P35555 2871 aaKnown RBP12.85□□□□□ -0.35
SMURF1-203ENST00000472627 ARHGAP21Q5T5U3 1957 aa12.85□□□□□ -0.35
SMURF1-203ENST00000472627 MPDZO75970 2070 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 TRIM64A6NGJ6 449 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 TRIM64BA6NI03 449 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 BTNL10A8MVZ5 291 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 DYRK3O43781 588 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 B3GALT2O43825 422 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 SERPINA6P08185 405 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 RPL21P46778 160 aaKnown RBP12.84□□□□□ -0.35
SMURF1-203ENST00000472627 ZNF136P52737 540 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 AP1S2P56377 157 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 RAB38P57729 211 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 RNF4P78317 190 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 BTN3A2P78410 334 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 CDK16Q00536 496 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 STX4Q12846 297 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 SEL1L2Q5TEA6 688 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 NSUN5P2Q63ZY6 315 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 LRRC25Q8N386 305 aaPredicted RBP12.84□□□□□ -0.35
SMURF1-203ENST00000472627 GAL3ST3Q96A11 431 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 PERPQ96FX8 193 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 JSRP1Q96MG2 331 aaPredicted RBP12.84□□□□□ -0.35
SMURF1-203ENST00000472627 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
SMURF1-203ENST00000472627 SLC6A15Q9H2J7 730 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 CNIH4Q9P003 139 aa12.84□□□□□ -0.35
SMURF1-203ENST00000472627 TCRBV7S2A1N4TA0A589 114 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 CD8B2A6NJW9 211 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 COX7A2P14406 83 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 ETS1P14921 441 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 GDF1P27539 372 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 PPP2R1BP30154 601 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 PIGAP37287 484 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 DHX9Q08211 1270 aaKnown RBP12.83□□□□□ -0.36
SMURF1-203ENST00000472627 SERTAD2Q14140 314 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 RCAN2Q14206 197 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 EFTUD2Q15029 972 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMURF1-203ENST00000472627 RBBP5Q15291 538 aaKnown RBP12.83□□□□□ -0.36
SMURF1-203ENST00000472627 MPEG1Q2M385 716 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 HMBOX1Q6NT76 420 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 MBOAT1Q6ZNC8 495 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 C20orf204Q6ZNR8 217 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMURF1-203ENST00000472627 RASGEF1CQ8N431 466 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 LRRC57Q8N9N7 239 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 TTLQ8NG68 377 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 CALML6Q8TD86 181 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 TRIB1Q96RU8 372 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 EPB41L4BQ9H329 900 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 SEMA4BQ9NPR2 832 aaPredicted RBP12.83□□□□□ -0.36
SMURF1-203ENST00000472627 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
SMURF1-203ENST00000472627 CAMK2AQ9UQM7 478 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 NBEAL1Q6ZS30 2694 aa12.83□□□□□ -0.36
SMURF1-203ENST00000472627 GRID2IPA4D2P6 1211 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 SMIM10L1P0DMW3 83 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 GCKP35557 465 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 TRPC1P48995 793 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 EEF1A1P68104 462 aaKnown RBP12.82□□□□□ -0.36
SMURF1-203ENST00000472627 REEP5Q00765 189 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 DUSP8Q13202 625 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 DHX34Q14147 1143 aaKnown RBP12.82□□□□□ -0.36
SMURF1-203ENST00000472627 TBCELQ5QJ74 424 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 EEF1A1P5Q5VTE0 462 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 POMZP3Q6PJE2 187 aa12.82□□□□□ -0.36
SMURF1-203ENST00000472627 SCIMPQ6UWF3 145 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms