RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 CSAG2Q9Y5P2 127 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 MAU2Q9Y6X3 613 aa8.63□□□□□ -1.03
SMC4-213ENST00000472282 PTPN13Q12923 2485 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 TMEM120BA0PK00 339 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 BLACEA4D250 179 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ZNF860A6NHJ4 632 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 TCP11X1B4DZS4 312 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 H0YIV9 168 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 DPM1O60762 260 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 SEMA7AO75326 666 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 SH3BGRLO75368 114 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 CLEC3AO75596 197 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 TBX6O95947 436 aaPredicted RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 B3GALT4O96024 378 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 BPGMP07738 259 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 SERPINA6P08185 405 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 DHRS4L1P0CG22 281 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ZNF888P0CJ79 500 aaPredicted RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 FBLP22087 321 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 HMOX2P30519 316 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 HNRNPH1P31943 449 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 SERPINB4P48594 390 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 RRADP55042 308 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 RAB8AP61006 207 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 NAA20P61599 178 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 STXBP1P61764 594 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 ASPHQ12797 758 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 MRPL49Q13405 166 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 FAM53BQ14153 422 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 MYBPC3Q14896 1274 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ZRSR2Q15696 482 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 TCHHL1Q5QJ38 904 aaPredicted RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 TTC19Q6DKK2 380 aaPredicted RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 HIST2H2BCQ6DN03 193 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 OVCH1Q7RTY7 1134 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 GALNT16Q8N428 558 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 CDYL2Q8N8U2 506 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 OR9A4Q8NGU2 314 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 HUS1BQ8NHY5 278 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 WDR20Q8TBZ3 569 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 UTP15Q8TED0 518 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 AGAP11Q8TF27 550 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ZNF473Q8WTR7 871 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 COL26A1Q96A83 441 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 REPS1Q96D71 796 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 MVB12AQ96EY5 273 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 MMABQ96EY8 250 aaPredicted RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 SEC16BQ96JE7 1060 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ATP6V1G3Q96LB4 118 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 KCNA7Q96RP8 456 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 MTERF1Q99551 399 aaKnown RBP8.62□□□□□ -1.03
SMC4-213ENST00000472282 C17orf62Q9BQA9 187 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 KLHL31Q9H511 634 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ANKHQ9HCJ1 492 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 MID1IP1Q9NPA3 183 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 DMRT3Q9NQL9 472 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 ZNF446Q9NWS9 450 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 TRPS1Q9UHF7 1281 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 STK38LQ9Y2H1 464 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 PCDHGB7Q9Y5F8 929 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 HS3ST3B1Q9Y662 390 aa8.62□□□□□ -1.03
SMC4-213ENST00000472282 HECTD1Q9ULT8 2610 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 A0A0G2JN53 185 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 WDR91A4D1P6 747 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 URADA6NGE7 173 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 VSTM2BA6NLU5 285 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SGK494L7N484 410 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 PEX12O00623 359 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 UBFD1O14562 309 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 ERI3O43414 337 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 VPS4BO75351 444 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 RDH16O75452 317 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 KLHL18O94889 574 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 NSA2O95478 260 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 ESRRBO95718 433 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 MLYCDO95822 493 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 ALOX12P18054 663 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 MMP11P24347 488 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SERPINB1P30740 379 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 HPDP32754 393 aaPredicted RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 AVPR1BP47901 424 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 NEK2P51955 445 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 EFNA3P52797 238 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 PKNOX1P55347 436 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 RPS13P62277 151 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 PHEXP78562 749 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 MAT1AQ00266 395 aaKnown RBP8.61□□□□□ -1.03
SMC4-213ENST00000472282 Q0VFX4 171 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 IFT88Q13099 833 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 HERC3Q15034 1050 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 SYT16Q17RD7 645 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 DEFB134Q4QY38 66 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 VWA5B1Q5TIE3 1220 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 FRG2Q64ET8 278 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 PRMT9Q6P2P2 845 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 TRIM40Q6P9F5 258 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 KIRREL2Q6UWL6 708 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 ABHD13Q7L211 337 aa8.61□□□□□ -1.03
SMC4-213ENST00000472282 PDSS2Q86YH6 399 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms