RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 COL6A6A6NMZ7 2263 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ATRXP46100 2492 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 MYOCOSA0A1B0GUC4 107 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 BLACEA4D250 179 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 G3V2L1 256 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 MAN1A2O60476 641 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 LDB3O75112 727 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 EEDO75530 441 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 MYO1DO94832 1006 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 OR4F21O95013 312 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ZIC2O95409 532 aaPredicted RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 PDYNP01213 254 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 PROCP04070 461 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 IFNA16P05015 189 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 NUDT17P0C025 328 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 KRT4P19013 534 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 PPP2R1BP30154 601 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 CRHR1P34998 444 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 BSGP35613 385 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ST13P50502 369 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 TNFSF10P50591 281 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 TAS2R50P59544 299 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 STX4Q12846 297 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 IFT88Q13099 833 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 SERTAD2Q14140 314 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 CCDC153Q494R4 210 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 SGO1Q5FBB7 561 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ACER2Q5QJU3 275 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 C10orf62Q5T681 223 aaPredicted RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 C18orf63Q68DL7 685 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 MRM1Q6IN84 353 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 EMBQ6PCB8 327 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 GPR180Q86V85 440 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 RPS19BP1Q86WX3 136 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 KIF2BQ8N4N8 673 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 SLC5A8Q8N695 610 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 B3GNT7Q8NFL0 401 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 SELENOMQ8WWX9 145 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 CAVIN3Q969G5 261 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ANKRD9Q96BM1 317 aaPredicted RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 L3HYPDHQ96EM0 354 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 PARD6BQ9BYG5 372 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ROPN1BQ9BZX4 212 aaPredicted RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 RNF32Q9H0A6 362 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.04
SYN3-211ENST00000472027 C12orf65Q9H3J6 166 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 ELOVL6Q9H5J4 265 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 DDX31Q9H8H2 851 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 ROPN1Q9HAT0 212 aaPredicted RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 FARSBQ9NSD9 589 aaKnown RBP8.56□□□□□ -1.04
SYN3-211ENST00000472027 ASF1BQ9NVP2 202 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 MS4A12Q9NXJ0 267 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 VTI1BQ9UEU0 232 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 TRPS1Q9UHF7 1281 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 PPT2Q9UMR5 302 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ATG4BQ9Y4P1 393 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 ASB4Q9Y574 426 aa8.56□□□□□ -1.04
SYN3-211ENST00000472027 A0A0A6YYD5 115 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TRAV17A0A0B4J275 112 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 SYNDIG1LA6NDD5 238 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 OR5H15A6NDH6 313 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TCP11X1B4DZS4 312 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 COPEO14579 308 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 PROM1O43490 865 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TMPRSS11DO60235 418 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 PLIN3O60664 434 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 MLYCDO95822 493 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 GBAP04062 536 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 KLK1P06870 262 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 FAM58BPP0C7Q3 252 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 MYL2P10916 166 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TNNI3P19429 210 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 GNLYP22749 145 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TLX1P31314 330 aaPredicted RBP8.55□□□□□ -1.04
SYN3-211ENST00000472027 CD96P40200 585 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 CLCN2P51788 898 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 GPR143P51810 404 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 HNRNPH2P55795 449 aaKnown RBP8.55□□□□□ -1.04
SYN3-211ENST00000472027 ID2Q02363 134 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 SLC18A2Q05940 514 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 IFFO1Q0D2I5 559 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TERF2Q15554 542 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 ELAVL1Q15717 326 aaKnown RBP8.55□□□□□ -1.04
SYN3-211ENST00000472027 FAM219BQ5XKK7 198 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 CYP20A1Q6UW02 462 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 ZYG11AQ6WRX3 759 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 OR4N5Q8IXE1 308 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 C4orf33Q8N1A6 199 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 BEST3Q8N1M1 668 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TMEM132CQ8N3T6 1108 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 RIBC1Q8N443 379 aaPredicted RBP8.55□□□□□ -1.04
SYN3-211ENST00000472027 CDYL2Q8N8U2 506 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 APCDD1LQ8NCL9 501 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 GALNT11Q8NCW6 608 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 C7orf57Q8NEG2 295 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 SUN3Q8TAQ9 357 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 TANKQ92844 425 aa8.55□□□□□ -1.04
SYN3-211ENST00000472027 UCN3Q969E3 161 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms