RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 LIN28AQ9H9Z2 209 aaKnown RBP20.98■□□□□ 0.95
C9orf3-213ENST00000471978 LYRM4Q9HD34 91 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 KCMF1Q9P0J7 381 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 UBXN8O00124 270 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 PRRG2O14669 202 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 KERAO60938 352 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 OR2J2O76002 312 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 LTA4HP09960 611 aaKnown RBP20.97■□□□□ 0.95
C9orf3-213ENST00000471978 PCNAP12004 261 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 E2F2Q14209 437 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 ZDHHC24Q6UX98 284 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 ZNF793Q6ZN11 406 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 C16orf47Q6ZP98 133 aaPredicted RBP20.97■□□□□ 0.95
C9orf3-213ENST00000471978 DOLPP1Q86YN1 238 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 DAZLQ92904 295 aaKnown RBP20.97■□□□□ 0.95
C9orf3-213ENST00000471978 PHF12Q96QT6 1004 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 ATOH8Q96SQ7 321 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 MAPKAP1Q9BPZ7 522 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 TIMMDC1Q9NPL8 285 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 IGSF5Q9NSI5 407 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 OPTCQ9UBM4 332 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 VTI1BQ9UEU0 232 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 ERVK-11Q9UQG0 969 aa20.97■□□□□ 0.95
C9orf3-213ENST00000471978 TMEM200CA6NKL6 621 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 K7EPI3 171 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 RTCAO00442 366 aaKnown RBP20.96■□□□□ 0.95
C9orf3-213ENST00000471978 SH3BGRLO75368 114 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 ATP5A1P25705 553 aaKnown RBP20.96■□□□□ 0.95
C9orf3-213ENST00000471978 GPR85P60893 370 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 NAB1Q13506 487 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 TMEM35AQ53FP2 167 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 MED27Q6P2C8 311 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 HSDL2Q6YN16 418 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 NCCRP1Q6ZVX7 275 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-213ENST00000471978 CHSY3Q70JA7 882 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 FGD2Q7Z6J4 655 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 LAS2Q8IYD9 372 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 C17orf53Q8N3J3 647 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-213ENST00000471978 ACOT4Q8N9L9 421 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 MORN4Q8NDC4 146 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 OR14A16Q8NHC5 309 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 PTPMT1Q8WUK0 201 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-213ENST00000471978 UBTD2Q8WUN7 234 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 MYOTQ9UBF9 498 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 SPACA6W5XKT8 324 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 ADGRG4Q8IZF6 3080 aa20.96■□□□□ 0.95
C9orf3-213ENST00000471978 NCOA6Q14686 2063 aaPredicted RBP20.95■□□□□ 0.94
C9orf3-213ENST00000471978 A8MVJ9 347 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 HS6ST1O60243 411 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 LDB3O75112 727 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 TGFB1P01137 390 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 TUBB4AP04350 444 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 SNRPB2P08579 225 aaKnown RBP20.95■□□□□ 0.94
C9orf3-213ENST00000471978 COX6B1P14854 86 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 TNNI3P19429 210 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 ETF1P62495 437 aaKnown RBP20.95■□□□□ 0.94
C9orf3-213ENST00000471978 AP5B1Q2VPB7 878 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 SYT10Q6XYQ8 523 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 C3P1Q6ZMU1 363 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 GPALPP1Q8IXQ4 340 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 ZFP62Q8NB50 900 aaPredicted RBP20.95■□□□□ 0.94
C9orf3-213ENST00000471978 C16orf52Q8NHV5 167 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 SREK1Q8WXA9 508 aaKnown RBP20.95■□□□□ 0.94
C9orf3-213ENST00000471978 ASB15Q8WXK1 588 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 NXNL1Q96CM4 212 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 OR8D2Q9GZM6 311 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 HPF1Q9NWY4 346 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 ACOT9Q9Y305 439 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 OTOGQ6ZRI0 2925 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 GTF3C1Q12789 2109 aa20.95■□□□□ 0.94
C9orf3-213ENST00000471978 A0A1B0GTH9 108 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 C17orf105B2RV13 164 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 E9PLN8 166 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 WWP2O00308 870 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 SAP18O00422 153 aaKnown RBP20.94■□□□□ 0.94
C9orf3-213ENST00000471978 CDC40O60508 579 aaKnown RBP eCLIP20.94■□□□□ 0.944e-7■■■■□ 25.7
C9orf3-213ENST00000471978 CLDN14O95500 239 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 EPB42P16452 691 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 HIST1H1TP22492 207 aaPredicted RBP20.94■□□□□ 0.94
C9orf3-213ENST00000471978 SERPINB1P30740 379 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 PTGER4P35408 488 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 SSR2P43308 183 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 ID2Q02363 134 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 SERTAD2Q14140 314 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 CDSNQ15517 529 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 IL20RBQ6UXL0 311 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 EID3Q8N140 333 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 PSD4Q8NDX1 1056 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 OR7G3Q8NG95 312 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 MTFMTQ96DP5 389 aaKnown RBP20.94■□□□□ 0.94
C9orf3-213ENST00000471978 CMTM7Q96FZ5 175 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 VKORC1Q9BQB6 163 aa20.94■□□□□ 0.94
C9orf3-213ENST00000471978 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.94■□□□□ 0.94
C9orf3-213ENST00000471978 SYCE1LA8MT33 242 aa20.93■□□□□ 0.94
C9orf3-213ENST00000471978 OR6B1O95007 311 aa20.93■□□□□ 0.94
C9orf3-213ENST00000471978 SCELO95171 688 aa20.93■□□□□ 0.94
C9orf3-213ENST00000471978 CPN2P22792 545 aa20.93■□□□□ 0.94
C9orf3-213ENST00000471978 PTGS2P35354 604 aa20.93■□□□□ 0.94
C9orf3-213ENST00000471978 GUCY2DQ02846 1103 aa20.93■□□□□ 0.94
C9orf3-213ENST00000471978 PCDH1Q08174 1060 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms