RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 UHMK1Q8TAS1 419 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 UBE2E3Q969T4 207 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 RELTQ969Z4 430 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 SCMH1Q96GD3 660 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 SMC6Q96SB8 1091 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 NPAS2Q99743 824 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 ROGDIQ9GZN7 287 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 AICDAQ9GZX7 198 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 CDCP1Q9H5V8 836 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 TRIM45Q9H8W5 580 aaPredicted RBP12.64□□□□□ -0.39
HMGN1-211ENST00000471260 KCNK9Q9NPC2 374 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 FGFR1OP2Q9NVK5 253 aa12.64□□□□□ -0.39
HMGN1-211ENST00000471260 A1L4Q6 167 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 ASPDHA6ND91 283 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 GABRR3A8MPY1 467 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SYCE1LA8MT33 242 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 C4orf51C9J302 202 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 TM9SF1O15321 606 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 KERAO60938 352 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 DCTN3O75935 186 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 FAM155BO75949 473 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 CLDN1O95832 211 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SLC35E2BP0CK96 405 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 TFEBP19484 476 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 MAOAP21397 527 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 EEF1DP29692 281 aaKnown RBP12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SERPINB1P30740 379 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 MTTPP55157 894 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 RAB38P57729 211 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 RBPJQ06330 500 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 RUNX2Q13950 521 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 DOC2AQ14183 400 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 KRTCAP3Q53RY4 240 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 FCRLBQ6BAA4 426 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 GFRALQ6UXV0 394 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SCUBE1Q8IWY4 988 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 CYP4X1Q8N118 509 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 AMER2Q8N7J2 671 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SNX31Q8N9S9 440 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 NFAM1Q8NET5 270 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-211ENST00000471260 RHEBL1Q8TAI7 183 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 QRFPRQ96P65 431 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SERINC2Q96SA4 455 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 ACSS3Q9H6R3 686 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 NECTIN3Q9NQS3 549 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 NUDT4Q9NZJ9 180 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 SEC14L3Q9UDX4 400 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 ZNF490Q9ULM2 529 aaPredicted RBP12.63□□□□□ -0.39
HMGN1-211ENST00000471260 PPIEQ9UNP9 301 aaKnown RBP12.63□□□□□ -0.39
HMGN1-211ENST00000471260 ACOT9Q9Y305 439 aa12.63□□□□□ -0.39
HMGN1-211ENST00000471260 DIDO1Q9BTC0 2240 aaKnown RBP12.63□□□□□ -0.39
HMGN1-211ENST00000471260 A0A087X1B8 175 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 FAM227AF5H4B4 570 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 FCHO1O14526 889 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 CCNT2O60583 730 aaKnown RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 PRAMEF4O60810 478 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 TBX6O95947 436 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 TAC1P20366 129 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 TRHRP34981 398 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 KCNC1P48547 511 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 CLCN2P51788 898 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 MLF1P58340 268 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 OC90Q02509 493 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 IRF8Q02556 426 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 BNIP1Q12981 228 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 CHIT1Q13231 466 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 EFTUD2Q15029 972 aaKnown RBP eCLIP12.62□□□□□ -0.392e-22■■■■■ 47.5
HMGN1-211ENST00000471260 ZRSR2Q15696 482 aaKnown RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 FAM83EQ2M2I3 478 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 TMEM35AQ53FP2 167 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 PRAMEF9Q5VWM5 478 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 SPINK14Q6IE38 97 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 MTFR2Q6P444 385 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 ABHD17CQ6PCB6 329 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 VN1R5Q7Z5H4 357 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 B3GNT7Q8NFL0 401 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 THAP3Q8WTV1 239 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 UBTD2Q8WUN7 234 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 ESAMQ96AP7 390 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 SIGLEC12Q96PQ1 595 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 KCNC2Q96PR1 638 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 RAB3IPQ96QF0 476 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 ATOH8Q96SQ7 321 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 DEFB126Q9BYW3 111 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 ALG9Q9H6U8 611 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 COPS7BQ9H9Q2 264 aaPredicted RBP12.62□□□□□ -0.39
HMGN1-211ENST00000471260 PRTFDC1Q9NRG1 225 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 ADGRE2Q9UHX3 823 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 DAPP1Q9UN19 280 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 USH1CQ9Y6N9 552 aa12.62□□□□□ -0.39
HMGN1-211ENST00000471260 K7EPI3 171 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 MAN1A2O60476 641 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 CTNSO60931 367 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 NEURL1O76050 574 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 UNC5CO95185 931 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms