RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 EDF1O60869 148 aaKnown RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 CCNDBP1O95273 360 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 OTCP00480 354 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 VIMP08670 466 aaKnown RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 GDF5P43026 501 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SMSP52788 366 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 HK2P52789 917 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 CASP6P55212 293 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 CDH13P55290 713 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 PKNOX1P55347 436 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ABATP80404 500 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 PMP22Q01453 160 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF33BQ06732 778 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 C3AR1Q16581 482 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SYT16Q17RD7 645 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 FBXO48Q5FWF7 155 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ARL13AQ5H913 290 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF766Q5HY98 468 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 CES4AQ5XG92 561 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 PLAG1Q6DJT9 500 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 H3F3CQ6NXT2 135 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SUSD1Q6UWL2 747 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 LCTLQ6UWM7 567 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 Q6ZPB1 254 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 GOLGA7Q7Z5G4 137 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 THOC6Q86W42 341 aaKnown RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 CRLF3Q8IUI8 442 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 LRRC56Q8IYG6 542 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SNX31Q8N9S9 440 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 METTL21AQ8WXB1 218 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 RERGQ96A58 199 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ESAMQ96AP7 390 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 NSUN5Q96P11 429 aaKnown RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SORT1Q99523 831 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 YIPF2Q9BWQ6 316 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 VN1R1Q9GZP7 353 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 NSRP1Q9H0G5 558 aaKnown RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ZBTB26Q9HCK0 441 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SLCO1B3Q9NPD5 702 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SEMA4BQ9NPR2 832 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 STMN3Q9NZ72 180 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 TAC3Q9UHF0 121 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SH3BGRL2Q9UJC5 107 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 SLC22A14Q9Y267 594 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 RAP2CQ9Y3L5 183 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ASB1Q9Y576 335 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 KCNE2Q9Y6J6 123 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 NCOA6Q14686 2063 aaPredicted RBP8.53□□□□□ -1.04
SF3A1-206ENST00000471037 MYO7BQ6PIF6 2116 aa8.53□□□□□ -1.04
SF3A1-206ENST00000471037 ASPDHA6ND91 283 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 SLCO1B7G3V0H7 640 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 P2RX6O15547 441 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ITM2AO43736 263 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 UGDHO60701 494 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 LYPLA1O75608 230 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 WISP2O76076 250 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 NSA2O95478 260 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 CLDN14O95500 239 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ESRRBO95718 433 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ENO1P06733 434 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 CHRNGP07510 517 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 SNRPB2P08579 225 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 FGF4P08620 206 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 GNAZP19086 355 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 SSTR2P30874 369 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ARRB2P32121 409 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 AVPR1BP47901 424 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 CCNG1P51959 295 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 MAT1AQ00266 395 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 SRSF11Q05519 484 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 TRAF3Q13114 568 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 NDUFA9Q16795 377 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ACER2Q5QJU3 275 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 THEMIS2Q5TEJ8 643 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 FAM47EQ6ZV65 393 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 GPRIN3Q6ZVF9 776 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 RPS27LQ71UM5 84 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 CPEB2Q7Z5Q1 589 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 AFAP1L2Q8N4X5 818 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 AMER2Q8N7J2 671 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ACBD4Q8NC06 268 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 PPFIBP2Q8ND30 876 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 MDS2Q8NDY4 140 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ADAMTS18Q8TE60 1221 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 TRPC4APQ8TEL6 797 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 AGAP11Q8TF27 550 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ATP6V1E2Q96A05 226 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 PYCR2Q96C36 320 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 MTFMTQ96DP5 389 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 C14orf79Q96F83 325 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 SCMH1Q96GD3 660 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 MAGED4Q96JG8 741 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 FAR2Q96K12 515 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 ZNF354BQ96LW1 612 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 GPR137Q96N19 417 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 OR4K3Q96R72 315 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms