RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 DNAJC13O75165 2243 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 CELSR1Q9NYQ6 3014 aa16.26■□□□□ 0.19
COL7A1-208ENST00000470076 FAM187AA6NFU0 413 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 TMEM200CA6NKL6 621 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 FAM159BA6NKW6 160 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 CDC40O60508 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL7A1-208ENST00000470076 OR2J2O76002 312 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 S100BP04271 92 aaPredicted RBP16.25■□□□□ 0.19
COL7A1-208ENST00000470076 GSTA2P09210 222 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 CD22P20273 847 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 RAB10P61026 200 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 IRF8Q02556 426 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 CHIT1Q13231 466 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 SERTAD2Q14140 314 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 PAOXQ6QHF9 649 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 LRRC70Q7Z2Q7 622 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 MAATS1Q7Z4T9 603 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 CD163Q86VB7 1156 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 C7orf57Q8NEG2 295 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 UBE2E3Q969T4 207 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 TBCDQ9BTW9 1192 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 ALOXE3Q9BYJ1 711 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 CD244Q9BZW8 370 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 DPH5Q9H2P9 285 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 RNF112Q9ULX5 631 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 SPACA6W5XKT8 324 aa16.25■□□□□ 0.19
COL7A1-208ENST00000470076 ANKRD17O75179 2603 aaKnown RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 CCNT2O60583 730 aaKnown RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 EPORP19235 508 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 SPRP35270 261 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 CASP2P42575 452 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 E2F2Q14209 437 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 TMEM35AQ53FP2 167 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 TMEM211Q6ICI0 200 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 IL20RBQ6UXL0 311 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 C16orf47Q6ZP98 133 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 RGS9BPQ6ZS82 235 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 C3orf62Q6ZUJ4 267 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 OR8K3Q8NH51 312 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 STAG3L4Q8TBR4 150 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 PTPMT1Q8WUK0 201 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 C14orf79Q96F83 325 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 RASL10BQ96S79 203 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 MS4A8Q9BY19 250 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 ENKD1Q9H0I2 346 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 TP63Q9H3D4 680 aaPredicted RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 LIN28AQ9H9Z2 209 aaKnown RBP16.24■□□□□ 0.19
COL7A1-208ENST00000470076 DEPPQ9NTK1 212 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 F8P00451 2351 aa16.24■□□□□ 0.19
COL7A1-208ENST00000470076 ACOT7O00154 380 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 WWP2O00308 870 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 OR6B1O95007 311 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 C1QAP02745 245 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 TNNI3P19429 210 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 SOX3P41225 446 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 MSH2P43246 934 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 HK2P52789 917 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 MRPS25P82663 173 aaKnown RBP16.23■□□□□ 0.19
COL7A1-208ENST00000470076 GRTP1Q5TC63 336 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 CHSY3Q70JA7 882 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 UBE3DQ7Z6J8 389 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 CTAGE3PQ8IX95 158 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 ACOT4Q8N9L9 421 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 ACBD4Q8NC06 268 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 OR2M7Q8NG81 312 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 OR52N2Q8NGI0 321 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 ZNF473Q8WTR7 871 aaKnown RBP16.23■□□□□ 0.19
COL7A1-208ENST00000470076 ASB5Q8WWX0 329 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 EXT2Q93063 718 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 MAPKAP1Q9BPZ7 522 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 PHACTR1Q9C0D0 580 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 OR8D2Q9GZM6 311 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 NUDT4Q9NZJ9 180 aa16.23■□□□□ 0.19
COL7A1-208ENST00000470076 C17orf105B2RV13 164 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 LDB3O75112 727 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 SCELO95171 688 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 HIST1H1TP22492 207 aaPredicted RBP16.22■□□□□ 0.19
COL7A1-208ENST00000470076 ATP5A1P25705 553 aaKnown RBP16.22■□□□□ 0.19
COL7A1-208ENST00000470076 SERPINB1P30740 379 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 PPIAP62937 165 aaKnown RBP16.22■□□□□ 0.19
COL7A1-208ENST00000470076 RNF4P78317 190 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 PLGLB1Q02325 96 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 AP5B1Q2VPB7 878 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 MED27Q6P2C8 311 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 ZNF793Q6ZN11 406 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 RTL4Q6ZR62 310 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 GK5Q6ZS86 529 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 LAS2Q8IYD9 372 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 SPATA4Q8NEY3 305 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 OR5L2Q8NGL0 311 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 SLC2A12Q8TD20 617 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 CHTF18Q8WVB6 975 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 DEFB127Q9H1M4 99 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 ALG9Q9H6U8 611 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 ZDHHC11Q9H8X9 412 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 NMRAL1Q9HBL8 299 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 PRM3Q9NNZ6 103 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 GRHL1Q9NZI5 618 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 COPS7AQ9UBW8 275 aa16.22■□□□□ 0.19
COL7A1-208ENST00000470076 HRH3Q9Y5N1 445 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms