RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 MLF1P58340 268 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 SLC13A2Q13183 592 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 OR1C1Q15619 314 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 ELAVL1Q15717 326 aaKnown RBP13.13□□□□□ -0.31
COMMD3-208ENST00000470045 ADGRD1Q6QNK2 874 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 TIFABQ6ZNK6 161 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 RNF175Q8N4F7 328 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 TMEM151AQ8N4L1 468 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 DNAJB8Q8NHS0 232 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 WDR20Q8TBZ3 569 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 ZNF717Q9BY31 904 aaPredicted RBP13.13□□□□□ -0.31
COMMD3-208ENST00000470045 MRPL46Q9H2W6 279 aaKnown RBP13.13□□□□□ -0.31
COMMD3-208ENST00000470045 OR51B5Q9H339 312 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 CDCP1Q9H5V8 836 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 PCTPQ9UKL6 214 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
COMMD3-208ENST00000470045 ASPDHA6ND91 283 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 PLPP1O14494 284 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 OR7A17O14581 309 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 CRYABP02511 175 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 RPS17P08708 135 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 EEF1DP29692 281 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 SSR2P43308 183 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 CLCN2P51788 898 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 IGLV3-21P80748 117 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 TRAF3Q13114 568 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 CUL3Q13618 768 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 ZNF468Q5VIY5 522 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 OR4C11Q6IEV9 310 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 CLNKQ7Z7G1 428 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 ZNF227Q86WZ6 799 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 MYLK4Q86YV6 388 aaPredicted RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 ZCCHC7Q8N3Z6 543 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 LRRN4CLQ8ND94 238 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 RGMAQ96B86 450 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 REPS1Q96D71 796 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 MTERF1Q99551 399 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 MRPL57Q9BQC6 102 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 NTMT1Q9BV86 223 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 HES7Q9BYE0 225 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 DEFB126Q9BYW3 111 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 EPB41L4BQ9H329 900 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
COMMD3-208ENST00000470045 ANKRD10Q9NXR5 420 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 VTI1BQ9UEU0 232 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 FETUBQ9UGM5 382 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 RNF11Q9Y3C5 154 aa13.12□□□□□ -0.31
COMMD3-208ENST00000470045 TRBV11-1A0A0K0K1C0 115 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 FOXE1O00358 373 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SAP18O00422 153 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SH3BGRLO75368 114 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 CLDN9O95484 217 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 STSP08842 583 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 RHOXF2BP0C7M4 288 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 MST1P26927 711 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 ST13P50502 369 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 RPS13P62277 151 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 PHEXP78562 749 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 PMP22Q01453 160 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SERTAD2Q14140 314 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 ZRSR2Q15696 482 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 CPSF6Q16630 551 aaKnown RBP eCLIP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 GGTA1PQ4G0N0 100 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 C4orf17Q53FE4 359 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SPINK14Q6IE38 97 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 MRM1Q6IN84 353 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 LCA5Q86VQ0 697 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 TMEM132CQ8N3T6 1108 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 HORMAD2Q8N7B1 307 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 EIF1ADQ8N9N8 165 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 TMEM178AQ8NBL3 297 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 OR52B6Q8NGF0 335 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 PTPMT1Q8WUK0 201 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 NCLNQ969V3 563 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 ANKRD9Q96BM1 317 aaPredicted RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 MTBPQ96DY7 904 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 PHF21BQ96EK2 531 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SCYL1Q96KG9 808 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 RHOXF2Q9BQY4 288 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 CENPKQ9BS16 269 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SORBS1Q9BX66 1292 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 C1QTNF3Q9BXJ4 246 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 NOL11Q9H8H0 719 aaKnown RBP13.11□□□□□ -0.31
COMMD3-208ENST00000470045 L2HGDHQ9H9P8 463 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 SPACA6W5XKT8 324 aa13.11□□□□□ -0.31
COMMD3-208ENST00000470045 MAST4O15021 2626 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 A0A0A6YYD5 115 aa13.1□□□□□ -0.31
COMMD3-208ENST00000470045 A8MT66 165 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms