RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 CD274Q9NZQ7 290 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 HCN3Q9P1Z3 774 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 MYEF2Q9P2K5 600 aaKnown RBP4.66□□□□□ -1.66
SF3B1-207ENST00000468925 BTNL2Q9UIR0 455 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 FBXO10Q9UK96 956 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 GJD2Q9UKL4 321 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 TBX20Q9UMR3 447 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 PLEKHA6Q9Y2H5 1048 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 CRYL1Q9Y2S2 319 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NUBP2Q9Y5Y2 271 aa4.66□□□□□ -1.66
SF3B1-207ENST00000468925 NAV1Q8NEY1 1877 aa4.65□□□□□ -1.66
SF3B1-207ENST00000468925 MEIKINA0A087WXM9 373 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SLC22A23A1A5C7 686 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ASB14A6NK59 587 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 A8MV72 311 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 E9PQ18 207 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 QSOX1O00391 747 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GFRA2O00451 464 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MEIS1O00470 390 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AP3D1O14617 1153 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 IMPA2O14732 288 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PDCD5O14737 125 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 FABP7O15540 132 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CHP2O43745 196 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 XPNPEP2O43895 674 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SELENOFO60613 162 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AQP8O94778 261 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RGS11O94810 467 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CNOT4O95628 575 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 IL33O95760 270 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PAK4O96013 591 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 IFNA2P01563 188 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ESR1P03372 595 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 C4BPAP04003 597 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SCG5P05408 212 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 LCKP06239 509 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SBK2P0C263 348 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CLEC2LP0C7M8 214 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PRG2P13727 222 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 JUPP14923 745 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RAC2P15153 192 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TSPAN8P19075 237 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PVALBP20472 110 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AGXTP21549 392 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GPD1P21695 349 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GALP22466 123 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 DNASE1P24855 282 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MIPP30301 263 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 HIBADHP31937 336 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 YWHABP31946 246 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ACSL1P33121 698 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 LIPAP38571 399 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RPS19P39019 145 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MATKP42679 507 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RPL35P42766 123 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MAP2K4P45985 399 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 POLR2JP52435 117 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 C1QTNF8P60827 252 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GMFBP60983 142 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ABATP80404 500 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 IL1RL1Q01638 556 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF33AQ06730 810 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SREBF2Q12772 1141 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ZNF155Q12901 538 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ILF3Q12906 894 aaKnown RBP eCLIP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MAD2L1Q13257 205 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PLD1Q13393 1074 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RAPSNQ13702 412 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 FGFBP1Q14512 234 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 KRT33BQ14525 404 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 IRF3Q14653 427 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TRAM2Q15035 370 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PON3Q15166 354 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SLC14A2Q15849 920 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ETFDHQ16134 617 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SV2CQ496J9 727 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 VPS26BQ4G0F5 336 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 IQCCQ4KMZ1 466 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PYDC2Q56P42 97 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 AVPI1Q5T686 147 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MANEALQ5VSG8 457 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ATG9BQ674R7 924 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 NAPEPLDQ6IQ20 393 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RPL13AP3Q6NVV1 102 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 BHLHB9Q6PI77 547 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 TBPL2Q6SJ96 375 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 SPESP1Q6UW49 350 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 LAYNQ6UX15 382 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 BAIAP2L2Q6UXY1 529 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 LCNL1Q6ZST4 164 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 BRINP3Q76B58 766 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 GPR149Q86SP6 731 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 RBM23Q86U06 439 aaKnown RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 PIGZQ86VD9 579 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 KCNMB4Q86W47 210 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 LDHDQ86WU2 507 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 ZFPM1Q8IX07 1006 aa4.65□□□□□ -1.67
SF3B1-207ENST00000468925 CENPLQ8N0S6 344 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-207ENST00000468925 MS4A15Q8N5U1 240 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms