RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 E2F2Q14209 437 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 KBTBD12Q3ZCT8 623 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 ISCA2Q86U28 154 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 CTAGE3PQ8IX95 158 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 TMEM132CQ8N3T6 1108 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 OR52N2Q8NGI0 321 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 PHF10Q8WUB8 498 aaKnown RBP22.75■■□□□ 1.23
PTCH1-210ENST00000468211 VKORC1Q9BQB6 163 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 ALOXE3Q9BYJ1 711 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 VTI1BQ9UEU0 232 aa22.75■■□□□ 1.23
PTCH1-210ENST00000468211 A0A0G2JMM0 328 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 A0A1W2PPB8 328 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 A0A1W2PRS3 328 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 KIR3DP1A8MWS1 328 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 CDC40O60508 579 aaKnown RBP eCLIP22.74■■□□□ 1.23
PTCH1-210ENST00000468211 LDB3O75112 727 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 PDE9AO76083 593 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 SLC35E2BP0CK96 405 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 PTGS2P35354 604 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 MSH2P43246 934 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 ID2Q02363 134 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 TBCCQ15814 346 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 RNF175Q8N4F7 328 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 MARVELD2Q8N4S9 558 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 PPM1NQ8N819 430 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 PSD4Q8NDX1 1056 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 FAM57AQ8TBR7 257 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 ZNF473Q8WTR7 871 aaKnown RBP22.74■■□□□ 1.23
PTCH1-210ENST00000468211 MYOTQ9UBF9 498 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 ERVK-11Q9UQG0 969 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 CLCA3PQ9Y6N3 262 aa22.74■■□□□ 1.23
PTCH1-210ENST00000468211 WWP2O00308 870 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 ZNF354AO60765 605 aaPredicted RBP22.73■■□□□ 1.23
PTCH1-210ENST00000468211 ATP5A1P25705 553 aaKnown RBP22.73■■□□□ 1.23
PTCH1-210ENST00000468211 HPDP32754 393 aaPredicted RBP22.73■■□□□ 1.23
PTCH1-210ENST00000468211 SOX3P41225 446 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 CASP2P42575 452 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 PLTPP55058 493 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 LAPTM5Q13571 262 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 EFTUD2Q15029 972 aaKnown RBP eCLIP22.73■■□□□ 1.23
PTCH1-210ENST00000468211 PAGE2BQ5JRK9 111 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 GRTP1Q5TC63 336 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 IL20RBQ6UXL0 311 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 LRRC70Q7Z2Q7 622 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 MAATS1Q7Z4T9 603 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 CD163Q86VB7 1156 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 ACOT4Q8N9L9 421 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 LURAP1Q96LR2 239 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 KCNC2Q96PR1 638 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 RASL10BQ96S79 203 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 ATOH8Q96SQ7 321 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 LYRM4Q9HD34 91 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 TIMMDC1Q9NPL8 285 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 PLSCR2Q9NRY7 297 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 IGSF5Q9NSI5 407 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 PPT2Q9UMR5 302 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 HCFC1P51610 2035 aa22.73■■□□□ 1.23
PTCH1-210ENST00000468211 PHF3Q92576 2039 aaKnown RBP22.73■■□□□ 1.23
PTCH1-210ENST00000468211 A8MVJ9 347 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 UBXN8O00124 270 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 SAP18O00422 153 aaKnown RBP22.72■■□□□ 1.23
PTCH1-210ENST00000468211 TGFB1P01137 390 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 S100BP04271 92 aaPredicted RBP22.72■■□□□ 1.23
PTCH1-210ENST00000468211 TUBB4AP04350 444 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 TPOP07202 933 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 GSTA2P09210 222 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 ELAVL4P26378 380 aaKnown RBP22.72■■□□□ 1.23
PTCH1-210ENST00000468211 SPRP35270 261 aaPredicted RBP22.72■■□□□ 1.23
PTCH1-210ENST00000468211 HK2P52789 917 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 STX4Q12846 297 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 ZDHHC24Q6UX98 284 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 HSDL2Q6YN16 418 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 MORN4Q8NDC4 146 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 STAG3L4Q8TBR4 150 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 FBXO25Q8TCJ0 367 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 ASB15Q8WXK1 588 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 ANKRD9Q96BM1 317 aaPredicted RBP22.72■■□□□ 1.23
PTCH1-210ENST00000468211 SDCCAG3Q96C92 435 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 TBCDQ9BTW9 1192 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 SORBS1Q9BX66 1292 aaKnown RBP22.72■■□□□ 1.23
PTCH1-210ENST00000468211 OR8D2Q9GZM6 311 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 DEFB127Q9H1M4 99 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 HPF1Q9NWY4 346 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 NUDT4Q9NZJ9 180 aa22.72■■□□□ 1.23
PTCH1-210ENST00000468211 AKAP9Q99996 3911 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 G3V3Y1 287 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 PCNAP12004 261 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 POU3F2P20265 443 aaPredicted RBP22.71■■□□□ 1.23
PTCH1-210ENST00000468211 TGM3Q08188 693 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 SLMAPQ14BN4 828 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 HIST2H2ACQ16777 129 aaPredicted RBP22.71■■□□□ 1.23
PTCH1-210ENST00000468211 ZNF750Q32MQ0 723 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 HIST2H2AA3Q6FI13 130 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 CCDC25Q86WR0 208 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 LAS2Q8IYD9 372 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 OR2M7Q8NG81 312 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 OR14A16Q8NHC5 309 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 FBF1Q8TES7 1133 aa22.71■■□□□ 1.23
PTCH1-210ENST00000468211 DAZLQ92904 295 aaKnown RBP22.71■■□□□ 1.23
PTCH1-210ENST00000468211 C17orf105B2RV13 164 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms