RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	ADCK2	Q7Z695	626 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	PAQR7	Q86WK9	346 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	MFSD9	Q8NBP5	474 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	CHTF18	Q8WVB6	975 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	ZNF285	Q96NJ3	590 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	NDC1	Q9BTX1	674 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	SLC25A23	Q9BV35	468 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	SLC6A20	Q9NP91	592 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	FARSB	Q9NSD9	589 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	DHCR7	Q9UBM7	475 aa	Known RBP	11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	ADAM29	Q9UKF5	820 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	SLC12A4	Q9UP95	1085 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	SH2B3	Q9UQQ2	575 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	PADI2	Q9Y2J8	665 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	GPR45	Q9Y5Y3	372 aa		11.42	□□□□□ -0.58
CTNS-205	ENST00000467663	IGKV1-8	A0A0C4DH67	115 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	ERICH4	A6NGS2	130 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	OR1F1	O43749	312 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	CEACAM4	O75871	244 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	ONECUT2	O95948	504 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	PDGFA	P04085	211 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	ALDOC	P09972	364 aa	Known RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	JAK1	P23458	1154 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	PIK3R1	P27986	724 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	CCL11	P51671	97 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	NEK2	P51955	445 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	ARSF	P54793	590 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	C21orf58	P58505	322 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	STXBP1	P61764	594 aa	Known RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	RPL38	P63173	70 aa	Known RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	HMGCS1	Q01581	520 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	CHAF1B	Q13112	559 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	CYLC2	Q14093	348 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	SSPN	Q14714	243 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	NKAIN1	Q4KMZ8	207 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	RFTN2	Q52LD8	501 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	TCTE1	Q5JU00	501 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	IL23R	Q5VWK5	629 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	MLIP	Q5VWP3	458 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	TMEM198	Q66K66	360 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	NIPAL1	Q6NVV3	410 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	MRPL14	Q6P1L8	145 aa	Known RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	SCIMP	Q6UWF3	145 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	MED25	Q71SY5	747 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	METTL4	Q8N3J2	472 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	TEX19	Q8NA77	164 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	MTFMT	Q96DP5	389 aa	Known RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	C11orf24	Q96F05	449 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	MTERF1	Q99551	399 aa	Known RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	ZBTB18	Q99592	522 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	MS4A8	Q9BY19	250 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	ROGDI	Q9GZN7	287 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	PRM3	Q9NNZ6	103 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	IRAK4	Q9NWZ3	460 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	IFT80	Q9P2H3	777 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	GPN3	Q9UHW5	284 aa	Predicted RBP	11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	BSN	Q9UPA5	3926 aa		11.41	□□□□□ -0.58
CTNS-205	ENST00000467663	SEC16A	O15027	2179 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663		A0A088AWK7	358 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663		A0A1B0GX78	115 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	FAM234B	A2RU67	622 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	FITM1	A5D6W6	292 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	SRPX2	O60687	465 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	CTSV	O60911	334 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	CNOT3	O75175	753 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	GUCY1B2	O75343	617 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	SLC22A3	O75751	556 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	NPPA	P01160	153 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	SNRPB2	P08579	225 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	SLC35G6	P0C7Q6	338 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	COX4I1	P13073	169 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	ZNF10	P21506	573 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	GPX3	P22352	226 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	CLDN8	P56748	225 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	RPS13	P62277	151 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	TRA2B	P62995	288 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	FOXK1	P85037	733 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	RGS1	Q08116	209 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	LRRC74A	Q0VAA2	488 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	DDX39B	Q13838	428 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	UBAP2L	Q14157	1087 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	ADPRM	Q3LIE5	342 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	YOD1	Q5VVQ6	348 aa	Predicted RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	KHDRBS2	Q5VWX1	349 aa	Known RBP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	NOXRED1	Q6NXP6	359 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	CYP20A1	Q6UW02	462 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	RAB43	Q86YS6	212 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	NATD1	Q8N6N6	113 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	PCYOX1L	Q8NBM8	494 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	CAMKV	Q8NCB2	501 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	OR2Y1	Q8NGV0	311 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	DNAJB8	Q8NHS0	232 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	NT5C	Q8TCD5	201 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	RGMA	Q96B86	450 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	IP6K3	Q96PC2	410 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	ZFYVE21	Q9BQ24	234 aa		11.4	□□□□□ -0.58
CTNS-205	ENST00000467663	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms