RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 DNASE1L1P49184 302 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 PGGT1BP53609 377 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 RNF4P78317 190 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 BTN3A2P78410 334 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 PLGLB1Q02325 96 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 GPS1Q13098 491 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 SLC10A1Q14973 349 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 MPEG1Q2M385 716 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 TOR1AIP1Q5JTV8 583 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 HECTD2Q5U5R9 776 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 SLCO4C1Q6ZQN7 724 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 THOC6Q86W42 341 aaKnown RBP11.25□□□□□ -0.61
UBR4-211ENST00000467272 TMEM132CQ8N3T6 1108 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 NAT8LQ8N9F0 302 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 PAQR8Q8TEZ7 354 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
UBR4-211ENST00000467272 NTNG2Q96CW9 530 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 HIST1H2AHQ96KK5 128 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 PWWP2AQ96N64 755 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 CSF3RQ99062 836 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 MDFIQ99750 246 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 HIST1H2AJQ99878 128 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 AIF1LQ9BQI0 150 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 CCDC77Q9BR77 488 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 H2AFJQ9BTM1 129 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 PRTFDC1Q9NRG1 225 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 HOMER3Q9NSC5 361 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 IARS2Q9NSE4 1012 aaKnown RBP11.25□□□□□ -0.61
UBR4-211ENST00000467272 SACM1LQ9NTJ5 587 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 TRMT1Q9NXH9 659 aaKnown RBP11.25□□□□□ -0.61
UBR4-211ENST00000467272 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 EDARQ9UNE0 448 aa11.25□□□□□ -0.61
UBR4-211ENST00000467272 ATP6AP2A0A1C7CYW4 349 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 A0A1W2PPR1 153 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 HSPB2A8KAH6 182 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 ATP6AP2O75787 350 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 IGKV3-11P04433 115 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 SLC6A12P48065 614 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 MAN2A2P49641 1150 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 ASCL1P50553 236 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 LIM2P55344 173 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 IL2P60568 153 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 CCZ1BP86790 482 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 CCZ1P86791 482 aaPredicted RBP11.24□□□□□ -0.61
UBR4-211ENST00000467272 CRYMQ14894 314 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 HSPB2Q16082 182 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 PIGGQ5H8A4 983 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 WLSQ5T9L3 541 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 WDR53Q7Z5U6 358 aaPredicted RBP11.24□□□□□ -0.61
UBR4-211ENST00000467272 CXorf67Q86X51 503 aaPredicted RBP11.24□□□□□ -0.61
UBR4-211ENST00000467272 PALM2Q8IXS6 379 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.24□□□□□ -0.61
UBR4-211ENST00000467272 OR14A16Q8NHC5 309 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 ZNF721Q8TF20 911 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 MAIP1Q8WWC4 291 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 ANKRD7Q92527 254 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 DAZLQ92904 295 aaKnown RBP11.24□□□□□ -0.61
UBR4-211ENST00000467272 NT5DC2Q9H857 520 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 ZNF629Q9UEG4 869 aaPredicted RBP11.24□□□□□ -0.61
UBR4-211ENST00000467272 ACAD8Q9UKU7 415 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 DAPP1Q9UN19 280 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 SLC22A14Q9Y267 594 aa11.24□□□□□ -0.61
UBR4-211ENST00000467272 TRGV5A0A0B4J1U4 118 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 GOLGA8MH3BSY2 632 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 CLDN4O14493 209 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 PRAMEF4O60810 478 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 GOSR1O95249 250 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 ETHE1O95571 254 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 EPPINO95925 133 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 KRT14P02533 472 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 HEXAP06865 529 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 INHBBP09529 407 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 EPXP11678 715 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 CD53P19397 219 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 GSTM2P28161 218 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 TIMP3P35625 211 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 PIGAP37287 484 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 VPS41P49754 854 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 DGKQP52824 942 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 STXBP1P61764 594 aaKnown RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 IGLV3-21P80748 117 aaPredicted RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 CDKL1Q00532 357 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 SLC13A2Q13183 592 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 PRAMEF9Q5VWM5 478 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 ABHD17CQ6PCB6 329 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 OPN5Q6U736 354 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 ZNF662Q6ZS27 426 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 FAM47EQ6ZV65 393 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 UBE3DQ7Z6J8 389 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 FBXW8Q8N3Y1 598 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 FAM47BQ8NA70 645 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 TNIP2Q8NFZ5 429 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 OR2L5Q8NG80 312 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 GOT1L1Q8NHS2 421 aaPredicted RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 NEIL3Q8TAT5 605 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 SLC2A12Q8TD20 617 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 PITHD1Q9GZP4 211 aaPredicted RBP11.23□□□□□ -0.61
UBR4-211ENST00000467272 ZFP64Q9NPA5 681 aa11.23□□□□□ -0.61
UBR4-211ENST00000467272 PRDM7Q9NQW5 492 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms