RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ZFP36L1Q07352 338 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 TFCP2Q12800 502 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 ZNF74Q16587 644 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 PHKG1Q16816 387 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 LETM2Q2VYF4 491 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 C6orf163Q5TEZ5 329 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 CAMKMTQ7Z624 323 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 DEFB128Q7Z7B8 93 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 ZBED8Q8IZ13 594 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 LGI2Q8N0V4 545 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 TC2NQ8N9U0 490 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 TDRD5Q8NAT2 981 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 Q8NBF4 154 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 ACER1Q8TDN7 264 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 ATL1Q8WXF7 558 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 SECISBP2LQ93073 1101 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 RADILQ96JH8 1075 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 LINC00615Q96LM1 132 aaPredicted RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 NKX3-1Q99801 234 aaPredicted RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 PANK2Q9BZ23 570 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 GPR88Q9GZN0 384 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 OR10A4Q9H209 315 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 RABEP2Q9H5N1 569 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 TLE6Q9H808 572 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 MED20Q9H944 212 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 HMG20BQ9P0W2 317 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 BCCIPQ9P287 314 aaKnown RBP eCLIP2.83□□□□□ -1.96
XRN1-206ENST00000467077 C5AR2Q9P296 337 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 C19orf25Q9UFG5 118 aaPredicted RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 IL17BQ9UHF5 180 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 DDX25Q9UHL0 483 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 PA2G4Q9UQ80 394 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 ELP1O95163 1332 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 IL16Q14005 1332 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 UMODL1Q5DID0 1318 aa2.83□□□□□ -1.96
XRN1-206ENST00000467077 PRRC2BQ5JSZ5 2229 aaKnown RBP2.83□□□□□ -1.96
XRN1-206ENST00000467077 DMDP11532 3685 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 TRBC2A0A5B9 178 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 URADA6NGE7 173 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 SRRM5B3KS81 715 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 O00370 1275 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 FPGTO14772 594 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 DKC1O60832 514 aaKnown RBP eCLIP2.82□□□□□ -1.96
XRN1-206ENST00000467077 TADA2AO75478 443 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 SLC25A27O95847 323 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 SNAI1O95863 264 aaPredicted RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 TRUB2O95900 331 aaKnown RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 UBTFL1P0CB47 393 aaPredicted RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 MYBL1P10243 752 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 GP1BBP13224 206 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 CPT2P23786 658 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 HLA-FP30511 346 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 ALDH3A2P51648 485 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 DYNLL1P63167 89 aaKnown RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 BEX3Q00994 111 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 KLC1Q07866 573 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 ITGA7Q13683 1181 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 EFTUD2Q15029 972 aaKnown RBP eCLIP2.82□□□□□ -1.96
XRN1-206ENST00000467077 MOGAT2Q3SYC2 334 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 MCMDC2Q4G0Z9 681 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 TATDN1Q6P1N9 297 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 CXCL17Q6UXB2 119 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 CATSPERDQ86XM0 798 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 TEKT4Q8WW24 435 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 TOMM40LQ969M1 308 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 CNDP2Q96KP4 475 aaKnown RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 C4orf45Q96LM5 186 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 PRICKLE1Q96MT3 831 aaPredicted RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 BAG1Q99933 345 aaPredicted RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 UPF3BQ9BZI7 483 aaKnown RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 MTMR12Q9C0I1 747 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 TRPV6Q9H1D0 765 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 UBE2ZQ9H832 354 aaPredicted RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 Q9H8V8 135 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 TEX10Q9NXF1 929 aaPredicted RBP2.82□□□□□ -1.96
XRN1-206ENST00000467077 GIMAP2Q9UG22 337 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 SLC24A2Q9UI40 661 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 WDR83OSQ9Y284 106 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 ROBO3Q96MS0 1386 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 COL4A6Q14031 1691 aa2.82□□□□□ -1.96
XRN1-206ENST00000467077 LCTP09848 1927 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 KIAA1217Q5T5P2 1943 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 MICAL3Q7RTP6 2002 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 A0A1W2PPM1 405 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 A8MXE2 369 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 H0YAE9 185 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 H7C0S8 307 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 TRIM77I1YAP6 450 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 PTGESO14684 152 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 CABYRO75952 493 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 GGPS1O95749 300 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 IGHEP01854 428 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 APOA4P06727 396 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 UQCRFS1P1P0C7P4 283 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 IRF2P14316 349 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 EEF1DP29692 281 aaKnown RBP2.81□□□□□ -1.96
XRN1-206ENST00000467077 MC5RP33032 325 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 TSFMP43897 325 aaKnown RBP2.81□□□□□ -1.96
XRN1-206ENST00000467077 TMEM50BP56557 158 aa2.81□□□□□ -1.96
XRN1-206ENST00000467077 RALGDSQ12967 914 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms