RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 VOPP1Q96AW1 172 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 VWCEQ96DN2 955 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 ZC3HAV1LQ96H79 300 aaKnown RBP17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 HRASLS5Q96KN8 279 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 OPALINQ96PE5 141 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 ARL15Q9NXU5 204 aa17.29■□□□□ 0.36
SNAPC3-205ENST00000467062 PLA2G10O15496 165 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 GLUD1P00367 558 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 URODP06132 367 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 TPOP07202 933 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 STSP08842 583 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 RPIAP49247 311 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 S100A12P80511 92 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 PTSQ03393 145 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 C10orf62Q5T681 223 aaPredicted RBP17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 GCNT7Q6ZNI0 430 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 UBE2J2Q8N2K1 259 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 NXPE1Q8N323 547 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 CPA6Q8N4T0 437 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF431Q8TF32 576 aaPredicted RBP17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 ZSWIM3Q96MP5 696 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 DPY30Q9C005 99 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 ZDHHC6Q9H6R6 413 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 DLGAP4Q9Y2H0 992 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 FKBP7Q9Y680 259 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 USP34Q70CQ2 3546 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 GBF1Q92538 1859 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 FABP12A6NFH5 140 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 EPB42P16452 691 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 HLA-FP30511 346 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 RPS19P39019 145 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 RAB14P61106 215 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 HTRA3P83110 453 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 TP53BP2Q13625 1128 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 TSTQ16762 297 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 GPR139Q6DWJ6 353 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF783Q6ZMS7 281 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 MSRB3Q8IXL7 192 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 OR7G3Q8NG95 312 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 RBPMSQ93062 196 aaKnown RBP17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 CIDECQ96AQ7 238 aaPredicted RBP17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 CNPPD1Q9BV87 410 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 RACGAP1Q9H0H5 632 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 PCDHGA6Q9Y5G7 932 aa17.28■□□□□ 0.36
SNAPC3-205ENST00000467062 NUP214P35658 2090 aaPredicted RBP17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 MYOFQ9NZM1 2061 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 GFRA2O00451 464 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 SH3BGRLO75368 114 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF254O75437 659 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 TP53P04637 393 aaPredicted RBP17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 PGRP06401 933 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 EPORP19235 508 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 TACR1P25103 407 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 SPAM1P38567 509 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 CYP4F2P78329 520 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 RAB33AQ14088 237 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 BOP1Q14137 746 aaKnown RBP17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 POM121L1PQ3SYA9 428 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF648Q5T619 568 aaPredicted RBP17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 SERPINA13PQ6UXR4 307 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 SLC39A11Q8N1S5 342 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 DUSP18Q8NEJ0 188 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 NETO1Q8TDF5 533 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 UFD1Q92890 307 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 ZNF558Q96NG5 402 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 QRFPRQ96P65 431 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 TSSK3Q96PN8 268 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 MYOCQ99972 504 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 BARHL1Q9BZE3 327 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 SLC6A15Q9H2J7 730 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 AMBNQ9NP70 447 aa17.27■□□□□ 0.36
SNAPC3-205ENST00000467062 IQCMA0A1B0GVH7 501 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 RGS14O43566 566 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 ORC5O43913 435 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 STK16O75716 305 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 CLEC2LP0C7M8 214 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 SRCP12931 536 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 LARS2Q15031 903 aaKnown RBP17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 CFAP77Q6ZQR2 320 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 OR2AP1Q8NGE2 309 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 FOXJ1Q92949 421 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 SCAMP4Q969E2 229 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 KIAA1143Q96AT1 154 aaPredicted RBP17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 OR52E6Q96RD3 313 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 MGLLQ99685 303 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 LRTM1Q9HBL6 345 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 SCML1Q9UN30 329 aa17.27■□□□□ 0.35
SNAPC3-205ENST00000467062 PLXNA4Q9HCM2 1894 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 WDPCPO95876 746 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 PDYNP01213 254 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 TSPAN19P0C672 248 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 ITPKAP23677 461 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 GPC1P35052 558 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 ALDH6A1Q02252 535 aaKnown RBP17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 CAMK2GQ13555 558 aaPredicted RBP17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 SF1Q15637 639 aaKnown RBP17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 PYDC2Q56P42 97 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 LIPIQ6XZB0 460 aa17.26■□□□□ 0.35
SNAPC3-205ENST00000467062 ATCAYQ86WG3 371 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms