RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 SAP18O00422 153 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 CLDN4O14493 209 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 RGS16O15492 202 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 PROM1O43490 865 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 TMPRSS11DO60235 418 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 TRIM13O60858 407 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 KRT6AP02538 564 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 KRT6BP04259 564 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 ALPPP05187 535 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 MAOAP21397 527 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 ITGA3P26006 1051 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 ALDH3A1P30838 453 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 ARL1P40616 181 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 KRT6CP48668 564 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 GPR143P51810 404 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 HNRNPH2P55795 449 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 OR4D2P58180 307 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLC26A5P58743 744 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 TNFRSF17Q02223 184 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 GALNT1Q10472 559 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 KLRB1Q12918 225 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 NFATC3Q12968 1075 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLAMF1Q13291 335 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 CRB2Q5IJ48 1285 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 CEP85LQ5SZL2 805 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 MFSD4BQ5TF39 518 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 AGAP7PQ5VUJ5 663 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 TTC19Q6DKK2 380 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 PAPD4Q6PIY7 484 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 GPR180Q86V85 440 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 NUDT13Q86X67 352 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 HOMEZQ8IX15 550 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 ARMC10Q8N2F6 343 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 CCNYL1Q8N7R7 359 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 RBMXL3Q8N7X1 1067 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 CDYL2Q8N8U2 506 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 GBP7Q8N8V2 638 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 NFAM1Q8NET5 270 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 METTL6Q8TCB7 284 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SELENOMQ8WWX9 145 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 ANKRD9Q96BM1 317 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 C11orf24Q96F05 449 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 THOC3Q96J01 351 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 CNDP1Q96KN2 507 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 AGAP4Q96P64 663 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 FAM111AQ96PZ2 611 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 LPAR4Q99677 370 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 GATA5Q9BWX5 397 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SORBS1Q9BX66 1292 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 IQCGQ9H095 443 aaKnown RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 TNFRSF12AQ9NP84 129 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 RRAGDQ9NQL2 400 aaPredicted RBP8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 PRTFDC1Q9NRG1 225 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SIRT5Q9NXA8 310 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 AHSPQ9NZD4 102 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SLC17A7Q9P2U7 560 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 PHF11Q9UIL8 331 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 SPACA6W5XKT8 324 aa8.88□□□□□ -0.99
SDCCAG3-208ENST00000466579 IGHV3-20A0A0C4DH32 117 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 SAGE2PA6NJ88 616 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 CDK2AP1O14519 115 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 NPHS1O60500 1241 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 DPM1O60762 260 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 SH3BGRLO75368 114 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ULK1O75385 1050 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 SPAG7O75391 227 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 SEC24DO94855 1032 aaPredicted RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 CELA2AP08217 269 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 FAM58BPP0C7Q3 252 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 DHRS4L1P0CG22 281 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ITGAMP11215 1152 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 TPP2P29144 1249 aaPredicted RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 SERPINB5P36952 375 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 CASRP41180 1078 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 HTR6P50406 440 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ASPHQ12797 758 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 BIKQ13323 160 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 MFAP5Q13361 173 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 SERTAD2Q14140 314 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 TCHHL1Q5QJ38 904 aaPredicted RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 FAM219BQ5XKK7 198 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 GALNT18Q6P9A2 607 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ISLR2Q6UXK2 745 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 PAGE2Q7Z2X7 111 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 COMMD6Q7Z4G1 85 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 TRIM46Q7Z4K8 759 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 LGI4Q8N135 537 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 CCDC63Q8NA47 563 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 FAM47BQ8NA70 645 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 BRIX1Q8TDN6 353 aaKnown RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ELP5Q8TE02 316 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 CHTF18Q8WVB6 975 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 TANKQ92844 425 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 MTFMTQ96DP5 389 aaKnown RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 MRPL1Q9BYD6 325 aaKnown RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 RNF32Q9H0A6 362 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ZBTB20Q9HC78 741 aaPredicted RBP8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 MID1IP1Q9NPA3 183 aa8.87□□□□□ -0.99
SDCCAG3-208ENST00000466579 ADAP2Q9NPF8 381 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms