RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CATSPERDQ86XM0 798 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 CACUL1Q86Y37 369 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 WDSUB1Q8N9V3 476 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 LEMD2Q8NC56 503 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 CCNYQ8ND76 341 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF248Q8NDW4 579 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR9Q2Q8NGE9 314 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR4A16Q8NH70 328 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR2T6Q8NHC8 308 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 ZNF519Q8TB69 540 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 U2AF1L4Q8WU68 220 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 GLYATL1Q969I3 302 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 GPR137Q96N19 417 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 PINK1Q9BXM7 581 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 CARD9Q9H257 536 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 SYTL2Q9HCH5 934 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 UBE2TQ9NPD8 197 aaPredicted RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 DDX28Q9NUL7 540 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 MED17Q9NVC6 651 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 VPS54Q9P1Q0 977 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 CACNG5Q9UF02 275 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 HOOK1Q9UJC3 728 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 DNPEPQ9ULA0 475 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 MRPS18CQ9Y3D5 142 aaKnown RBP3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 OR1A2Q9Y585 309 aa3.72□□□□□ -1.81
CDC42BPA-211ENST00000466538 K7EQD1 137 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 EEF2KO00418 725 aaKnown RBP3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 TRAFD1O14545 582 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 PRPSAP2O60256 369 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 PGK2P07205 417 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 ACP1P24666 158 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 MT3P25713 68 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 MAPK3P27361 379 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 PKLRP30613 574 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 CRYBA2P53672 197 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 TMEM50BP56557 158 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 EVCP57679 992 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 MSLNQ13421 630 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 GCKRQ14397 625 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 SMC1AQ14683 1233 aaKnown RBP3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 HEPACAMQ14CZ8 416 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 KRT31Q15323 416 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 HIST2H2AA3Q6FI13 130 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 LCLAT1Q6UWP7 414 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 MFSD7Q6UXD7 560 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 CDHR3Q6ZTQ4 885 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 CCDC197Q8NCU1 140 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 TMEM185AQ8NFB2 350 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR6M1Q8NGM8 313 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR4L1Q8NH43 312 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 TCP11Q8WWU5 503 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 ART5Q96L15 291 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 NSMCE3Q96MG7 304 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 AGPAT1Q99943 283 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 C1orf21Q9H246 121 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 SLC26A1Q9H2B4 701 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 DPEP3Q9H4B8 488 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 SPHK2Q9NRA0 654 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 NDE1Q9NXR1 346 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 NLGN3Q9NZ94 848 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 MTF2Q9Y483 593 aaPredicted RBP3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 WDR81Q562E7 1941 aa3.71□□□□□ -1.82
CDC42BPA-211ENST00000466538 IGLV7-46A0A075B6I9 117 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 CFAP73A6NFT4 308 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ARHGAP42A6NI28 874 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 YJEFN3A6XGL0 299 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 TFECO14948 347 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ARPC1BO15143 372 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 SSX5O60225 188 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 KIAA0513O60268 411 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 CSDE1O75534 798 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZNF821O75541 412 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 CLDN1O95832 211 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 SLC4A1P02730 911 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 CXCL10P02778 98 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 LYNP07948 512 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 GLRA1P23415 457 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 PDHA2P29803 388 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZFP36L2P47974 494 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 NUMBP49757 651 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 NDST2P52849 883 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 SRP54P61011 504 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 HERV-K104P63124 156 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 IL1RL1Q01638 556 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 RIGQ13278 110 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ZNF177Q13360 481 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 FAM189A2Q15884 450 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 TTC31Q49AM3 519 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 CCDC40Q4G0X9 1142 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 NKAIN2Q5VXU1 208 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ADAM5Q6NVV9 412 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 OLFM4Q6UX06 510 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 Q71RC1 249 aaPredicted RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 TAF8Q7Z7C8 310 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 ADAMTSL2Q86TH1 951 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 OR4N5Q8IXE1 308 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 GPR148Q8TDV2 347 aa3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 GTF3AQ92664 365 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-211ENST00000466538 RPGRIP1Q96KN7 1286 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms