RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 HPF1Q9NWY4 346 aa17.81■□□□□ 0.44
COL9A3-206ENST00000466532 PTBP2Q9UKA9 531 aaKnown RBP17.81■□□□□ 0.44
COL9A3-206ENST00000466532 TMEM200CA6NKL6 621 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 FANCGO15287 622 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 EPORP19235 508 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 MSH2P43246 934 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 IL20RBQ6UXL0 311 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 HSDL2Q6YN16 418 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 C3orf62Q6ZUJ4 267 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 LRRC70Q7Z2Q7 622 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 CTAGE3PQ8IX95 158 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 GPALPP1Q8IXQ4 340 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 MORN4Q8NDC4 146 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 OR52N2Q8NGI0 321 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 OR14A16Q8NHC5 309 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 CA5BP1Q8WTZ4 195 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 UBXN10Q96LJ8 280 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 MS4A8Q9BY19 250 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 ALOXE3Q9BYJ1 711 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 CD244Q9BZW8 370 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 ROGDIQ9GZN7 287 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 DEPPQ9NTK1 212 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 COQ3Q9NZJ6 369 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 MYOTQ9UBF9 498 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 VTI1BQ9UEU0 232 aa17.8■□□□□ 0.44
COL9A3-206ENST00000466532 NCKAP5O14513 1909 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 WWP2O00308 870 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 RAD51CO43502 376 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 LDB3O75112 727 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 PDE9AO76083 593 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 OR6B1O95007 311 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 TNNI3P19429 210 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 SPRP35270 261 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-206ENST00000466532 GMPRP36959 345 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 SOX3P41225 446 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 TBCCQ15814 346 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 ARHGAP11AQ6P4F7 1023 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 ZNF793Q6ZN11 406 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 CYS1Q717R9 158 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 MAATS1Q7Z4T9 603 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 UBE3DQ7Z6J8 389 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 SRFBP1Q8NEF9 429 aaKnown RBP17.79■□□□□ 0.44
COL9A3-206ENST00000466532 PTPMT1Q8WUK0 201 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-206ENST00000466532 RASL10BQ96S79 203 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 MAPKAP1Q9BPZ7 522 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 TBCDQ9BTW9 1192 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 OR8D2Q9GZM6 311 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 DEFB127Q9H1M4 99 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 ALG9Q9H6U8 611 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 LYRM4Q9HD34 91 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 GRHL1Q9NZI5 618 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 NUDT4Q9NZJ9 180 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 PYCARDQ9ULZ3 195 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 SPACA6W5XKT8 324 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 ARHGAP21Q5T5U3 1957 aa17.79■□□□□ 0.44
COL9A3-206ENST00000466532 RTCAO00442 366 aaKnown RBP17.78■□□□□ 0.44
COL9A3-206ENST00000466532 SH3BGRLO75368 114 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 C1QAP02745 245 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 GSTA2P09210 222 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 PCNAP12004 261 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 SSTR2P30874 369 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 HK2P52789 917 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 GPX6P59796 221 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 PLGLB1Q02325 96 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 C2orf54Q08AI8 447 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 SERTAD2Q14140 314 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 SLMAPQ14BN4 828 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 GRTP1Q5TC63 336 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 RAPH1Q70E73 1250 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 PPM1NQ8N819 430 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 ZNF321PQ8N8H1 164 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 ACOT4Q8N9L9 421 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 SPATA4Q8NEY3 305 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 OR2M7Q8NG81 312 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 STAG3L4Q8TBR4 150 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 ZNF473Q8WTR7 871 aaKnown RBP17.78■□□□□ 0.44
COL9A3-206ENST00000466532 UBE2E3Q969T4 207 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 PLSCR2Q9NRY7 297 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 HRH3Q9Y5N1 445 aa17.78■□□□□ 0.44
COL9A3-206ENST00000466532 INTS1Q8N201 2190 aaKnown RBP17.77■□□□□ 0.44
COL9A3-206ENST00000466532 ADGRG4Q8IZF6 3080 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 PINLYPA6NC86 204 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 FAM166BA8MTA8 275 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 C17orf105B2RV13 164 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 SUPT3HB4E1H0 165 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 ACOT7O00154 380 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 SUPT3HO75486 399 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 FAM155BO75949 473 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 ATP5A1P25705 553 aaKnown RBP17.77■□□□□ 0.44
COL9A3-206ENST00000466532 CASP2P42575 452 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 ID2Q02363 134 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 E2F2Q14209 437 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 KBTBD12Q3ZCT8 623 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 TMEM211Q6ICI0 200 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 MED27Q6P2C8 311 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 PAOXQ6QHF9 649 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 CEP128Q6ZU80 1094 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 CMC1Q7Z7K0 106 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 ISCA2Q86U28 154 aa17.77■□□□□ 0.44
COL9A3-206ENST00000466532 MARVELD2Q8N4S9 558 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms