RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 OR52N2Q8NGI0 321 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 ITFG2Q969R8 447 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 MAP4K5Q9Y4K4 846 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 IGHV1OR15-9A0A0B4J2B8 117 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 CCDC160A6NGH7 325 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 MYO1GB0I1T2 1018 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 ERI3O43414 337 aaKnown RBP17.35■□□□□ 0.37
COL9A3-205ENST00000466192 TNFRSF21O75509 655 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 GSTM2P28161 218 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 LAPTM4AQ15012 233 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 OR2T5Q6IEZ7 315 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 TRIM73Q86UV7 250 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 RNF130Q86XS8 419 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 TBC1D19Q8N5T2 526 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 OR2T29Q8NH02 315 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 ZFP28Q8NHY6 868 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 DGCR14Q96DF8 476 aaKnown RBP17.35■□□□□ 0.37
COL9A3-205ENST00000466192 FOXQ1Q9C009 403 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 CXorf36Q9H7Y0 433 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 PRDM7Q9NQW5 492 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 USE1Q9NZ43 259 aa17.35■□□□□ 0.37
COL9A3-205ENST00000466192 SEMG1P04279 462 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 PCGF2P35227 344 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 GSTM5P46439 218 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 TOR1AIP1Q5JTV8 583 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 ABHD17CQ6PCB6 329 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 TRIM48Q8IWZ4 208 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 SLC22A18Q96BI1 424 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 SLC6A18Q96N87 628 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 FCRL4Q96PJ5 515 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 OR2A14Q96R47 310 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 MBOAT4Q96T53 435 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 ASPSCR1Q9BZE9 553 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 BAG5Q9UL15 447 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 SNX8Q9Y5X2 465 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 CCDC88CQ9P219 2028 aa17.34■□□□□ 0.37
COL9A3-205ENST00000466192 VILLO15195 856 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 PDPK1O15530 556 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 SUV39H1O43463 412 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 GCM2O75603 506 aaPredicted RBP17.33■□□□□ 0.37
COL9A3-205ENST00000466192 PIGAP37287 484 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 PCBP4P57723 403 aaKnown RBP17.33■□□□□ 0.37
COL9A3-205ENST00000466192 TRA2BP62995 288 aaKnown RBP17.33■□□□□ 0.37
COL9A3-205ENST00000466192 KIR2DS3Q14952 304 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 TEAD4Q15561 434 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 TJAP1Q5JTD0 557 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 ARHGAP22Q7Z5H3 698 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 HIPK1Q86Z02 1210 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 OR2L5Q8NG80 312 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 OR8K5Q8NH50 307 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 NCSTNQ92542 709 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 EXOSC8Q96B26 276 aaKnown RBP17.33■□□□□ 0.37
COL9A3-205ENST00000466192 FAM210AQ96ND0 272 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 RDH12Q96NR8 316 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 BARD1Q99728 777 aaKnown RBP17.33■□□□□ 0.37
COL9A3-205ENST00000466192 GSDMCQ9BYG8 508 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 AMBRA1Q9C0C7 1298 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 EPS8L2Q9H6S3 715 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 C1GALT1Q9NS00 363 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 FAM118AQ9NWS6 357 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 THEGQ9P2T0 379 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 CPNE7Q9UBL6 633 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 APOBEC3BQ9UH17 382 aaKnown RBP17.33■□□□□ 0.37
COL9A3-205ENST00000466192 SNX11Q9Y5W9 270 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 CEP192Q8TEP8 1941 aa17.33■□□□□ 0.37
COL9A3-205ENST00000466192 ZW10O43264 779 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 ZNF217O75362 1048 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 VIPP01282 170 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 POLR2CP19387 275 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 FRKP42685 505 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 YAP1P46937 504 aaKnown RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 PXNP49023 591 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 PRIM2P49643 509 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 MANFP55145 182 aaKnown RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 TUBA4AP68366 448 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 GCNT6Q5T4J0 391 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 NDUFAF5Q5TEU4 345 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 SHQ1Q6PI26 577 aaKnown RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 CEP68Q76N32 757 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 VN1R4Q7Z5H5 301 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 ARL10Q8N8L6 244 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 PJA1Q8NG27 643 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 OR10G6Q8NH81 332 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 OR5P2Q8WZ92 322 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 TMIGD2Q96BF3 282 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 NMD3Q96D46 503 aaKnown RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 DTNBP1Q96EV8 351 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 ZNF764Q96H86 408 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 KCNC2Q96PR1 638 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 CDX2Q99626 313 aaPredicted RBP17.33■□□□□ 0.36
COL9A3-205ENST00000466192 TM9SF3Q9HD45 589 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 ADPRHL2Q9NX46 363 aa17.33■□□□□ 0.36
COL9A3-205ENST00000466192 OR6C74A6NCV1 312 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 FAM170BA6NMN3 283 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 OPN1SWP03999 348 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 UGT2B7P16662 529 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 MAGP20916 626 aa17.32■□□□□ 0.36
COL9A3-205ENST00000466192 HIST1H1TP22492 207 aaPredicted RBP17.32■□□□□ 0.36
COL9A3-205ENST00000466192 UQCRC2P22695 453 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms