RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
UBA3-208ENST00000465627 REXO4Q9GZR2 422 aaKnown RBP8.36□□□□□ -1.07
UBA3-208ENST00000465627 KLHL25Q9H0H3 589 aa8.36□□□□□ -1.07
UBA3-208ENST00000465627 DNAAF2Q9NVR5 837 aaKnown RBP8.36□□□□□ -1.07
UBA3-208ENST00000465627 SLAMF8Q9P0V8 285 aa8.36□□□□□ -1.07
UBA3-208ENST00000465627 ABCD2Q9UBJ2 740 aa8.36□□□□□ -1.07
UBA3-208ENST00000465627 ASB4Q9Y574 426 aa8.36□□□□□ -1.07
UBA3-208ENST00000465627 GMEB1Q9Y692 573 aa8.36□□□□□ -1.07
UBA3-208ENST00000465627 SPTBN1Q01082 2364 aaKnown RBP8.36□□□□□ -1.07
UBA3-208ENST00000465627 A0A1W2PQM1 296 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SLC9B1P1A6NJY1 282 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CFLARO15519 480 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SLC28A2O43868 658 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 NPPAP01160 153 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 STATHP02808 62 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 GBAP04062 536 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SYPP08247 313 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CKMT1AP12532 417 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 HIST1H1TP22492 207 aaPredicted RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 SLC6A2P23975 617 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ATP5A1P25705 553 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 FRKP42685 505 aaPredicted RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 GSTM5P46439 218 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 MTTPP55157 894 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 KCNK10P57789 538 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TRA2BP62995 288 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 MC1RQ01726 317 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 FOXM1Q08050 763 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CEACAM7Q14002 265 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 NR0B2Q15466 257 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 DPY19L1Q2PZI1 675 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TRMT5Q32P41 509 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 INAVAQ3KP66 663 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 PIGGQ5H8A4 983 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TOR1AIP1Q5JTV8 583 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SLC2A7Q6PXP3 512 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 LYPD8Q6UX82 237 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ZNF574Q6ZN55 896 aaPredicted RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 PRSS42Q7Z5A4 293 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 DEFB107AQ8IZN7 70 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 MMP21Q8N119 569 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TBC1D19Q8N5T2 526 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 OR7A2PQ8NGA2 310 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 GAL3ST3Q96A11 431 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 LRRC58Q96CX6 371 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 MTERF3Q96E29 417 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TCTN2Q96GX1 697 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SLC41A2Q96JW4 573 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CLPTM1LQ96KA5 538 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 KCNC2Q96PR1 638 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 C17orf62Q9BQA9 187 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TBCDQ9BTW9 1192 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 PAIP1Q9H074 479 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 REEP4Q9H6H4 257 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 WDR41Q9HAD4 459 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SLC6A13Q9NSD5 602 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TAS2R7Q9NYW3 318 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 AHSPQ9NZD4 102 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 KCMF1Q9P0J7 381 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TMEM9Q9P0T7 183 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TMEM181Q9P2C4 612 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CD300AQ9UGN4 299 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 LEF1Q9UJU2 399 aaPredicted RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 PRPF19Q9UMS4 504 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 MAPRE3Q9UPY8 281 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 MRPS2Q9Y399 296 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 PCDHA9Q9Y5H5 950 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 UNC13CQ8NB66 2214 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 A0A0J9YVX5 310 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 FITM1A5D6W6 292 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CCDC154A6NI56 674 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 B8ZZF3 427 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 NME4O00746 187 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ERI3O43414 337 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 RASSF9O75901 435 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 MYO1DO94832 1006 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 SORBS2O94875 1100 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 LRATO95237 230 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 MED26O95402 600 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 IL3P08700 152 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ALPPL2P10696 532 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 LAMP1P11279 417 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 CDH3P22223 829 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ALDH4A1P30038 563 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 TAS2R50P59544 299 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 PSME3P61289 254 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ELF3P78545 371 aaPredicted RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 SRSF11Q05519 484 aaKnown RBP8.35□□□□□ -1.07
UBA3-208ENST00000465627 KLC1Q07866 573 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 FXNQ16595 210 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 HKDC1Q2TB90 917 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 ARMC6Q6NXE6 501 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 IRGCQ6NXR0 463 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 C16orf89Q6UX73 402 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 FAM92BQ6ZTR7 304 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 PAGE2Q7Z2X7 111 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 NUDT13Q86X67 352 aa8.35□□□□□ -1.07
UBA3-208ENST00000465627 PDSS2Q86YH6 399 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms