RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 HNRNPH2P55795 449 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 BTG2P78543 158 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 TNFRSF17Q02223 184 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 ACTN3Q08043 901 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 TBL3Q12788 808 aaKnown RBP17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 STX4Q12846 297 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 CHAF1BQ13112 559 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 CRTC2Q53ET0 693 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 LANCL3Q6ZV70 420 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 ZNF595Q8IYB9 648 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 TSLPQ969D9 159 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 FER1L6-AS2Q96M78 137 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 ZNF717Q9BY31 904 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 PRORYQ9H606 182 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 PRDM9Q9NQV7 894 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 LANCL2Q9NS86 450 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 THAP1Q9NVV9 213 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 MARCOQ9UEW3 520 aaPredicted RBP17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 FBXL4Q9UKA2 621 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 ADAM29Q9UKF5 820 aa17.42■□□□□ 0.38
SCAMP3-204ENST00000465312 PRKRAO75569 313 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 TPP2P29144 1249 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 ALDH9A1P49189 494 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 RRADP55042 308 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 OR4D2P58180 307 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 RPL38P63173 70 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 C18orf63Q68DL7 685 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 BORAQ6PGQ7 559 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 QSOX2Q6ZRP7 698 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 TRIM46Q7Z4K8 759 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 ARFGAP2Q8N6H7 521 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 CLEC1AQ8NC01 280 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 ADAMTS17Q8TE56 1095 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 ZNF75CPQ92670 426 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 EXTL1Q92935 676 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 C20orf27Q9GZN8 174 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 RPF2Q9H7B2 306 aaKnown RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 LRTM1Q9HBL6 345 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 RIC8BQ9NVN3 520 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 ATG4BQ9Y4P1 393 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 MMACHCQ9Y4U1 282 aa17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 POLR3HQ9Y535 204 aaPredicted RBP17.41■□□□□ 0.38
SCAMP3-204ENST00000465312 NSG1A0A0A6YYJ2 146 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 IGHV3-20A0A0C4DH32 117 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 MYOCOSA0A1B0GUC4 107 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ATP6AP2A0A1C7CYW4 349 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 SERTM1A2A2V5 107 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 GLOD5A6NK44 160 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 A8MUA0 341 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 SOCS6O14544 535 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 LDB3O75112 727 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ATP6AP2O75787 350 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 IFNA16P05015 189 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 TIA1P31483 386 aaKnown RBP eCLIP17.4■□□□□ 0.381e-10■■□□□ 13.9
SCAMP3-204ENST00000465312 HNRNPFP52597 415 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 RHAGQ02094 409 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ID2Q02363 134 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ATP6AP1LQ52LC2 224 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ATG14Q6ZNE5 492 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 CPEB2Q7Z5Q1 589 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ANKRD37Q7Z713 158 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 TMEM52Q8NDY8 209 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 CHTF18Q8WVB6 975 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 APOBEC4Q8WW27 367 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 TUBGCP3Q96CW5 907 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 C19orf60Q96EN9 201 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 SORT1Q99523 831 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 MESP1Q9BRJ9 268 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 FAIM2Q9BWQ8 316 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 TUBB1Q9H4B7 451 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ZNF160Q9HCG1 818 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 PNO1Q9NRX1 252 aaKnown RBP17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 PNPOQ9NVS9 261 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 C1orf109Q9NX04 203 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 TEX10Q9NXF1 929 aaPredicted RBP17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 KCMF1Q9P0J7 381 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 MCM8Q9UJA3 840 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 LHX6Q9UPM6 363 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 ZFHX4Q86UP3 3567 aa17.4■□□□□ 0.38
SCAMP3-204ENST00000465312 BLACEA4D250 179 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 A6NL46 340 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 CYR61O00622 381 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 PCDH17O14917 1159 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 PEX11AO75192 247 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 SEC24DO94855 1032 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 AIFM1O95831 613 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 CYC1P08574 325 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 CCL11P51671 97 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 HSD17B7P56937 341 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 TBR1Q16650 682 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 SFT2D3Q587I9 215 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 IRAK1BP1Q5VVH5 260 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 CPZQ66K79 652 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 KIRREL2Q6UWL6 708 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 MED25Q71SY5 747 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 CRLF3Q8IUI8 442 aa17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 TMEM102Q8N9M5 508 aaPredicted RBP17.39■□□□□ 0.37
SCAMP3-204ENST00000465312 PLPP5Q8NEB5 264 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms