RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 B4GALT1P15291 398 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 EZRP15311 586 aaKnown RBP3.46□□□□□ -1.86
CLK1-208ENST00000464454 ZNF18P17022 549 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 UGT1A6P19224 532 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 UGT1A4P22310 534 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 OR1D2P34982 312 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 TNFSF10P50591 281 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 BACE1P56817 501 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 EVCP57679 992 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 GALK2Q01415 458 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 ZNF177Q13360 481 aaPredicted RBP3.46□□□□□ -1.86
CLK1-208ENST00000464454 GCKRQ14397 625 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 NECTIN1Q15223 517 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 CACUL1Q86Y37 369 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 METTL4Q8N3J2 472 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 CHCHD4Q8N4Q1 142 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 CCDC197Q8NCU1 140 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 GPR148Q8TDV2 347 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 AGAP4Q96P64 663 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 ERGIC2Q96RQ1 377 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 IWS1Q96ST2 819 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 S1PR3Q99500 378 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 NUSAP1Q9BXS6 441 aaKnown RBP3.46□□□□□ -1.86
CLK1-208ENST00000464454 UPF3AQ9H1J1 476 aaKnown RBP3.46□□□□□ -1.86
CLK1-208ENST00000464454 GPN1Q9HCN4 374 aaPredicted RBP3.46□□□□□ -1.86
CLK1-208ENST00000464454 NDE1Q9NXR1 346 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 ASIC3Q9UHC3 531 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 IL19Q9UHD0 177 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 UBQLN2Q9UHD9 624 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 TSPAN16Q9UKR8 245 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 SH3GLB1Q9Y371 365 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 OR1A2Q9Y585 309 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 TEX264Q9Y6I9 313 aa3.46□□□□□ -1.86
CLK1-208ENST00000464454 SLC9B1P1A6NJY1 282 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 SRRM4A7MD48 611 aaKnown RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 SLC28A1O00337 649 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 TFECO14948 347 aaPredicted RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 OGTO15294 1046 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 HSF2BPO75031 334 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 BCAS2O75934 225 aaPredicted RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 STBD1O95210 358 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 SFTPBP07988 381 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 ABHD2P08910 425 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 CT45A8P0DMV1 189 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 CT45A9P0DMV2 189 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 AREGP15514 252 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 AOC1P19801 751 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 PKLRP30613 574 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 RPL9P32969 192 aaKnown RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 NSFP46459 744 aaKnown RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 MFGE8Q08431 387 aaPredicted RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 MEF2DQ14814 521 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 FASTKD3Q14CZ7 662 aaKnown RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 HEPACAMQ14CZ8 416 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 MOGAT2Q3SYC2 334 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 RFTN2Q52LD8 501 aaPredicted RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 CT45A2Q5DJT8 189 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 CAPN13Q6MZZ7 669 aaPredicted RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 C17orf64Q86WR6 236 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 NEK11Q8NG66 645 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 OR52B6Q8NGF0 335 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 OR8H1Q8NGG4 311 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 OR4A16Q8NH70 328 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 ATP8B4Q8TF62 1192 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 SLCO4A1Q96BD0 722 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 ATXN7L3BQ96GX2 97 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 C18orf12Q96KH6 178 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 RUFY1Q96T51 708 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 VGLL1Q99990 258 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 CABLES2Q9BTV7 478 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 PINK1Q9BXM7 581 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 TEX13AQ9BXU3 409 aaPredicted RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 GANQ9H2C0 597 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 KCNK13Q9HB14 408 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 KCNMB3Q9NPA1 279 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 ACOXLQ9NUZ1 547 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 MED17Q9NVC6 651 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 ANO10Q9NW15 660 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 THEGQ9P2T0 379 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 TRIM10Q9UDY6 481 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 TRMT6Q9UJA5 497 aaKnown RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 MRPS18CQ9Y3D5 142 aaKnown RBP3.45□□□□□ -1.86
CLK1-208ENST00000464454 FGD5Q6ZNL6 1462 aa3.45□□□□□ -1.86
CLK1-208ENST00000464454 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 ANHXE9PGG2 379 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 TLR4O00206 839 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 TRAFD1O14545 582 aaPredicted RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 B4GAT1O43505 415 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 HTATSF1O43719 755 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 SORBS2O94875 1100 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 NXPH4O95158 308 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 FHITP49789 147 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 CNN1P51911 297 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 NDST2P52849 883 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 YBEYP58557 167 aaPredicted RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 ABCE1P61221 599 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 RBBP4Q09028 425 aa3.44□□□□□ -1.86
CLK1-208ENST00000464454 PPP1R8Q12972 351 aaKnown RBP3.44□□□□□ -1.86
CLK1-208ENST00000464454 KRT31Q15323 416 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms