RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 AGAP7PQ5VUJ5 663 aa16■□□□□ 0.15
VPS52-215ENST00000464425 OR4C11Q6IEV9 310 aa16■□□□□ 0.15
VPS52-215ENST00000464425 LETMD1Q6P1Q0 360 aa16■□□□□ 0.15
VPS52-215ENST00000464425 ATG14Q6ZNE5 492 aa16■□□□□ 0.15
VPS52-215ENST00000464425 QSOX2Q6ZRP7 698 aa16■□□□□ 0.15
VPS52-215ENST00000464425 RBMXL3Q8N7X1 1067 aaKnown RBP16■□□□□ 0.15
VPS52-215ENST00000464425 ACOT4Q8N9L9 421 aa16■□□□□ 0.15
VPS52-215ENST00000464425 PPP1R14CQ8TAE6 165 aa16■□□□□ 0.15
VPS52-215ENST00000464425 RAB3IL1Q8TBN0 382 aa16■□□□□ 0.15
VPS52-215ENST00000464425 WDR20Q8TBZ3 569 aa16■□□□□ 0.15
VPS52-215ENST00000464425 BRIX1Q8TDN6 353 aaKnown RBP16■□□□□ 0.15
VPS52-215ENST00000464425 RGMAQ96B86 450 aa16■□□□□ 0.15
VPS52-215ENST00000464425 IMMP1LQ96LU5 166 aa16■□□□□ 0.15
VPS52-215ENST00000464425 AGAP4Q96P64 663 aa16■□□□□ 0.15
VPS52-215ENST00000464425 WDR77Q9BQA1 342 aaPredicted RBP16■□□□□ 0.15
VPS52-215ENST00000464425 TUBB6Q9BUF5 446 aa16■□□□□ 0.15
VPS52-215ENST00000464425 SLC29A3Q9BZD2 475 aa16■□□□□ 0.15
VPS52-215ENST00000464425 ROGDIQ9GZN7 287 aa16■□□□□ 0.15
VPS52-215ENST00000464425 MID1IP1Q9NPA3 183 aa16■□□□□ 0.15
VPS52-215ENST00000464425 NECTIN3Q9NQS3 549 aa16■□□□□ 0.15
VPS52-215ENST00000464425 PRDM9Q9NQV7 894 aa16■□□□□ 0.15
VPS52-215ENST00000464425 C5AR2Q9P296 337 aa16■□□□□ 0.15
VPS52-215ENST00000464425 ANAPC2Q9UJX6 822 aa16■□□□□ 0.15
VPS52-215ENST00000464425 DAPP1Q9UN19 280 aa16■□□□□ 0.15
VPS52-215ENST00000464425 NUP210LQ5VU65 1888 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 WDR91A4D1P6 747 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 TMEM114B3SHH9 223 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 PYCARD-AS1I3L0S3 204 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 FOXE1O00358 373 aaPredicted RBP15.99■□□□□ 0.15
VPS52-215ENST00000464425 DPM1O60762 260 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 OR4F21O95013 312 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 ETHE1O95571 254 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 ITGAMP11215 1152 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 ICAM2P13598 275 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 PLA2G2AP14555 144 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 HIST1H1TP22492 207 aaPredicted RBP15.99■□□□□ 0.15
VPS52-215ENST00000464425 CD97P48960 835 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 HNRNPFP52597 415 aaKnown RBP15.99■□□□□ 0.15
VPS52-215ENST00000464425 ZNF33BQ06732 778 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 CHI3L2Q15782 390 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 BTBD16Q32M84 506 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 ARL13AQ5H913 290 aaPredicted RBP15.99■□□□□ 0.15
VPS52-215ENST00000464425 FRG2Q64ET8 278 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 LINC00696Q6ZRV3 163 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 ZCCHC23Q6ZST2 131 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 TRIM42Q8IWZ5 723 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 SIRT6Q8N6T7 355 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 TMEM52Q8NDY8 209 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 MGARPQ8TDB4 240 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 FRG2BQ96QU4 278 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 CSF3RQ99062 836 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 MAPKAP1Q9BPZ7 522 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 CENPKQ9BS16 269 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 PRTFDC1Q9NRG1 225 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 KCMF1Q9P0J7 381 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 LUZP4Q9P127 313 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 PTGFRNQ9P2B2 879 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 PPT2Q9UMR5 302 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 SNX6Q9UNH7 406 aa15.99■□□□□ 0.15
VPS52-215ENST00000464425 FASNP49327 2511 aaKnown RBP15.99■□□□□ 0.15
VPS52-215ENST00000464425 A8MUA0 341 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 CYR61O00622 381 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 CLDN4O14493 209 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 PLPP1O14494 284 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 FGF4P08620 206 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 NEFHP12036 1026 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 CASRP41180 1078 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 IFT88Q13099 833 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 SLC13A2Q13183 592 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 SLAMF1Q13291 335 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 PAPD4Q6PIY7 484 aaKnown RBP15.98■□□□□ 0.15
VPS52-215ENST00000464425 CNTRLQ7Z7A1 2325 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 CLNKQ7Z7G1 428 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 METTL6Q8TCB7 284 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 PSMF1Q92530 271 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 LPAR4Q99677 370 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 TRIM4Q9C037 500 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 EPN3Q9H201 632 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 ELOVL6Q9H5J4 265 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 LYRM4Q9HD34 91 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 FARSBQ9NSD9 589 aaKnown RBP15.98■□□□□ 0.15
VPS52-215ENST00000464425 FBXW2Q9UKT8 454 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 MMACHCQ9Y4U1 282 aa15.98■□□□□ 0.15
VPS52-215ENST00000464425 IGKV3D-11A0A0A0MRZ8 115 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 MYOCOSA0A1B0GUC4 107 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 A8MUI8 341 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 KLF11O14901 512 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 SCELO95171 688 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 KRT6AP02538 564 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 KRT6BP04259 564 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 CHN1P15882 459 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 BGNP21810 368 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 KRT6CP48668 564 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 STX3Q13277 289 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 CUL3Q13618 768 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 CES4AQ5XG92 561 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 B3GNTL1Q67FW5 361 aaPredicted RBP15.97■□□□□ 0.15
VPS52-215ENST00000464425 PLAG1Q6DJT9 500 aa15.97■□□□□ 0.15
VPS52-215ENST00000464425 JMJD6Q6NYC1 403 aaPredicted RBP15.97■□□□□ 0.15
VPS52-215ENST00000464425 IGFL3Q6UXB1 125 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms