RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 GPRC5BQ9NZH0 403 aa20.96■□□□□ 0.95
USP4-208ENST00000464168 LIPGQ9Y5X9 500 aa20.96■□□□□ 0.95
USP4-208ENST00000464168 A0A1B0GVC2 190 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 OR14I1A6ND48 311 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 SYNDIG1LA6NDD5 238 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 NCF1BA6NI72 391 aaPredicted RBP20.95■□□□□ 0.94
USP4-208ENST00000464168 NCF1CA8MVU1 366 aaPredicted RBP20.95■□□□□ 0.94
USP4-208ENST00000464168 TAPBPO15533 448 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 ZNF354AO60765 605 aaPredicted RBP20.95■□□□□ 0.94
USP4-208ENST00000464168 NCF1P14598 390 aaPredicted RBP20.95■□□□□ 0.94
USP4-208ENST00000464168 HPDP32754 393 aaPredicted RBP20.95■□□□□ 0.94
USP4-208ENST00000464168 EFTUD2Q15029 972 aaKnown RBP eCLIP20.95■□□□□ 0.94
USP4-208ENST00000464168 TGFBIQ15582 683 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 RTL4Q6ZR62 310 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 GK5Q6ZS86 529 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 TRILQ7L0X0 811 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 TMEM251Q8N6I4 163 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 OR14A16Q8NHC5 309 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 CAPZA3Q96KX2 299 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 F2RL3Q96RI0 385 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 SMC6Q96SB8 1091 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 TTYH2Q9BSA4 534 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 TMEM79Q9BSE2 394 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 MCMBPQ9BTE3 642 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 OR8D2Q9GZM6 311 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 FAM215AQ9Y5M1 114 aa20.95■□□□□ 0.94
USP4-208ENST00000464168 ANKHD1Q8IWZ3 2542 aaKnown RBP20.94■□□□□ 0.94
USP4-208ENST00000464168 BCKDKO14874 412 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 KLK8O60259 260 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 GLI4P10075 376 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 GGT5P36269 586 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 MAGEA5P43359 124 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 ART1P52961 327 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 RNF4P78317 190 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 FOXO1Q12778 655 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 RCN2Q14257 317 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 CES4AQ5XG92 561 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 RTL6Q6ICC9 239 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 ZNF585AQ6P3V2 769 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 TMEM200AQ86VY9 491 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 OR10Q1Q8NGQ4 319 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 OR8K3Q8NH51 312 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 NRGNQ92686 78 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 VPS39Q96JC1 886 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 SGCZQ96LD1 299 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 DERL2Q9GZP9 239 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 IL1RL2Q9HB29 575 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 DNAJC11Q9NVH1 559 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 ACANP16112 2415 aa20.94■□□□□ 0.94
USP4-208ENST00000464168 TP73O15350 636 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 WISP3O95389 354 aaPredicted RBP20.93■□□□□ 0.94
USP4-208ENST00000464168 CELA3AP09093 270 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 ARL4CP56559 192 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 STX4Q12846 297 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 FBXO48Q5FWF7 155 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 UBE3DQ7Z6J8 389 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 CLYBLQ8N0X4 340 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 FAM109AQ8N4B1 249 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 SPATA6LQ8N4H0 392 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 GOLM1Q8NBJ4 401 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 SLC2A12Q8TD20 617 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 KIAA1191Q96A73 305 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 ESAMQ96AP7 390 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 WDR34Q96EX3 536 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 RHOJQ9H4E5 214 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 COPS7BQ9H9Q2 264 aaPredicted RBP20.93■□□□□ 0.94
USP4-208ENST00000464168 POPDC3Q9HBV1 291 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 LYRM4Q9HD34 91 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 NAV3Q8IVL0 2385 aa20.93■□□□□ 0.94
USP4-208ENST00000464168 PRRC2AP48634 2157 aaKnown RBP20.92■□□□□ 0.94
USP4-208ENST00000464168 FIGNL2A6NMB9 653 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 C17orf105B2RV13 164 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 CLGNO14967 610 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 LDB3O75112 727 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 TNNI3P19429 210 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 CD22P20273 847 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 DNAJA1P31689 397 aaKnown RBP20.92■□□□□ 0.94
USP4-208ENST00000464168 DLX5P56178 289 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 MYBPHQ13203 477 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 DOC2AQ14183 400 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 FASTKD3Q14CZ7 662 aaKnown RBP20.92■□□□□ 0.94
USP4-208ENST00000464168 HYAL4Q2M3T9 481 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 OPN5Q6U736 354 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 B3GNT6Q6ZMB0 384 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 FAM47EQ6ZV65 393 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 SYDE1Q6ZW31 735 aaPredicted RBP20.92■□□□□ 0.94
USP4-208ENST00000464168 LIX1LQ8IVB5 337 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 FBXO36Q8NEA4 188 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 PTCD3Q96EY7 689 aaKnown RBP20.92■□□□□ 0.94
USP4-208ENST00000464168 SLC24A3Q9HC58 644 aa20.92■□□□□ 0.94
USP4-208ENST00000464168 SEMA4BQ9NPR2 832 aaPredicted RBP20.92■□□□□ 0.94
USP4-208ENST00000464168 A0A0G2JNJ9 132 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ATP6AP2A0A1C7CYW4 349 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 AQP7O14520 342 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 SUSD5O60279 629 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ATP6AP2O75787 350 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ETHE1O95571 254 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 CCL3P10147 92 aa20.91■□□□□ 0.94
USP4-208ENST00000464168 ZFP36L2P47974 494 aaKnown RBP20.91■□□□□ 0.94
USP4-208ENST00000464168 KCNC1P48547 511 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms