RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 SERINC2Q96SA4 455 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 CSF3RQ99062 836 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 NAP1L3Q99457 506 aaPredicted RBP16■□□□□ 0.15
HMGN1-210ENST00000464078 POLDIP3Q9BY77 421 aaKnown RBP16■□□□□ 0.15
HMGN1-210ENST00000464078 NT5DC2Q9H857 520 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 DLL4Q9NR61 685 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 SACM1LQ9NTJ5 587 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 B4GALT7Q9UBV7 327 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 DAPP1Q9UN19 280 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 PCDHGB3Q9Y5G1 929 aa16■□□□□ 0.15
HMGN1-210ENST00000464078 G3V3Y1 287 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 CDC7O00311 574 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 NRDCO43847 1150 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 HCN1O60741 890 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 CTNSO60931 367 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 BANF1O75531 89 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 MAN2A2P49641 1150 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 LIM2P55344 173 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 RNF4P78317 190 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 BMPR2Q13873 1038 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 SLBPQ14493 270 aaKnown RBP eCLIP15.99■□□□□ 0.15
HMGN1-210ENST00000464078 ZNF750Q32MQ0 723 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 MSS51Q4VC12 460 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 C1orf185Q5T7R7 199 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 RIPPLY2Q5TAB7 128 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 TRIM40Q6P9F5 258 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 OPN5Q6U736 354 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 FAM47EQ6ZV65 393 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 CLNKQ7Z7G1 428 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 ADAMTSL2Q86TH1 951 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 ZZZ3Q8IYH5 903 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 MS4A14Q96JA4 679 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 PBKQ96KB5 322 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 CLEC4MQ9H2X3 399 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-210ENST00000464078 RASSF1Q9NS23 344 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 OARD1Q9Y530 152 aa15.99■□□□□ 0.15
HMGN1-210ENST00000464078 NPEPPSL1A6NEC2 478 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 PGRMC1O00264 195 aaKnown RBP15.98■□□□□ 0.15
HMGN1-210ENST00000464078 H2AFYO75367 372 aaKnown RBP15.98■□□□□ 0.15
HMGN1-210ENST00000464078 IFNA16P05015 189 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 CELA3AP09093 270 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 GABRA1P14867 456 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 FOSL1P15407 271 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 CERS1P27544 350 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 MTTPP55157 894 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 WLSQ5T9L3 541 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 ABHD17CQ6PCB6 329 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 VN1R5Q7Z5H4 357 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 IGDCC3Q8IVU1 814 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 KRT78Q8N1N4 520 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 NKAPQ8N5F7 415 aaKnown RBP15.98■□□□□ 0.15
HMGN1-210ENST00000464078 OR5L2Q8NGL0 311 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 KIAA1191Q96A73 305 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 RMND5BQ96G75 393 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-210ENST00000464078 EGFL8Q99944 293 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 OR8D2Q9GZM6 311 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 REXO4Q9GZR2 422 aaKnown RBP15.98■□□□□ 0.15
HMGN1-210ENST00000464078 EHD1Q9H4M9 534 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 TUBA8Q9NY65 449 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-210ENST00000464078 GPRC5BQ9NZH0 403 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 ACAD8Q9UKU7 415 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 EDARQ9UNE0 448 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 ATG4BQ9Y4P1 393 aa15.98■□□□□ 0.15
HMGN1-210ENST00000464078 FBN3Q75N90 2809 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 DNALI1O14645 258 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 ZNF354AO60765 605 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 WDR47O94967 919 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 CCL3P10147 92 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 ENDOUP21128 410 aaKnown RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 KIR2DL3P43628 341 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 DNASE1L1P49184 302 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 PLA2G16P53816 162 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 FOXD4Q12950 439 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 SERTAD2Q14140 314 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 FRG1Q14331 258 aaKnown RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 SLC10A1Q14973 349 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 CEBPEQ15744 281 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 MPEG1Q2M385 716 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 STEAP4Q687X5 459 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 SLC2A12Q8TD20 617 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 CCT6BQ92526 530 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 RHBDF1Q96CC6 855 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 MBD6Q96DN6 1003 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 GPATCH1Q9BRR8 931 aaKnown RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 CAPS2Q9BXY5 557 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 ALOXE3Q9BYJ1 711 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 LIME1Q9H400 295 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 ZNF703Q9H7S9 590 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 COPS7BQ9H9Q2 264 aaPredicted RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 SH2D2AQ9NP31 389 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 PPANQ9NQ55 473 aaKnown RBP15.97■□□□□ 0.15
HMGN1-210ENST00000464078 JRKLQ9Y4A0 524 aa15.97■□□□□ 0.15
HMGN1-210ENST00000464078 ATP6AP2A0A1C7CYW4 349 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 C17orf105B2RV13 164 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 PROM1O43490 865 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 ATP6AP2O75787 350 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 P04436 131 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 GDF5P43026 501 aa15.96■□□□□ 0.15
HMGN1-210ENST00000464078 TGM3Q08188 693 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms