RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 HPSE2Q8WWQ2 592 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 RAPGEF5Q92565 580 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 DAZLQ92904 295 aaKnown RBP3.55□□□□□ -1.84
ITGB1-208ENST00000464001 MS4A10Q96PG2 267 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 SLC22A12Q96S37 553 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 DDOQ99489 341 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 FEVQ99581 238 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 CCT7Q99832 543 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 SSX3Q99909 188 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF559Q9BR84 538 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF416Q9BWM5 594 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 TBC1D10AQ9BXI6 508 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 NAPBQ9H115 298 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 VCX2Q9H322 139 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 FN3KQ9H479 309 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 SLA2Q9H6Q3 261 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 SUDS3Q9H7L9 328 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-208ENST00000464001 CHMP1AQ9HD42 196 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-208ENST00000464001 RAB9BQ9NP90 201 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 FAM114A2Q9NRY5 505 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 RNF186Q9NXI6 227 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 GDAP2Q9NXN4 497 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 SLCO1C1Q9NYB5 712 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 CNOT2Q9NZN8 540 aaKnown RBP3.55□□□□□ -1.84
ITGB1-208ENST00000464001 NDUFA13Q9P0J0 144 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 HBS1LQ9Y450 684 aaKnown RBP3.55□□□□□ -1.84
ITGB1-208ENST00000464001 MFHAS1Q9Y4C4 1052 aa3.55□□□□□ -1.84
ITGB1-208ENST00000464001 HEG1Q9ULI3 1381 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PHLPP2Q6ZVD8 1323 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 C15orf38-AP3S2A0A0A6YYH1 394 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 A0A1W2PRB8 838 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 GSAPA4D1B5 854 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 KBTBD13C9JR72 458 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CLDN4O14493 209 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 DNALI1O14645 258 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 KLF11O14901 512 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 XPO1O14980 1071 aaKnown RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 NDUFS4O43181 175 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 AP5Z1O43299 807 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 MED7O43513 233 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 BUB1O43683 1085 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 SLITRK3O94933 977 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CXCL10P02778 98 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ACP2P11117 423 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 VPREB1P12018 145 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ACADSP16219 412 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 GATA2P23769 480 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 NMBRP28336 390 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 SLC6A6P31641 620 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CNN1P51911 297 aaKnown RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ACY1Q03154 408 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PLA2G7Q13093 441 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 RIGQ13278 110 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ENPP2Q13822 863 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 STK11Q15831 433 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 LRRC73Q5JTD7 316 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 DCAF10Q5QP82 559 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 SPOUT1Q5T280 376 aaKnown RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 BSPRYQ5W0U4 402 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ARSKQ6UWY0 536 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PSTKQ8IV42 348 aaKnown RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PHC2Q8IXK0 858 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 C4orf19Q8IY42 314 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 TTC5Q8N0Z6 440 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ARL14Q8N4G2 192 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 RAB42Q8N4Z0 105 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 STEAP2Q8NFT2 490 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 OR56B1Q8NGI3 324 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 OR8J1Q8NGP2 316 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 OR2T11Q8NH01 316 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PEX13Q92968 403 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 SPATA33Q96N06 139 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ZNF582Q96NG8 517 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CPNE1Q99829 537 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PIGQQ9BRB3 760 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 TRAF4Q9BUZ4 470 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CLEC7AQ9BXN2 247 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CAPS2Q9BXY5 557 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 TBC1D17Q9HA65 648 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 FANCEQ9HB96 536 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 ACKR4Q9NPB9 350 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PPANQ9NQ55 473 aaKnown RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 TBC1D7Q9P0N9 293 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 CLEC4AQ9UMR7 237 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 GPR132Q9UNW8 380 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PLA2G4CQ9UP65 541 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 MOB4Q9Y3A3 225 aa3.54□□□□□ -1.84
ITGB1-208ENST00000464001 SPIN1Q9Y657 262 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-208ENST00000464001 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-208ENST00000464001 POLR3GO15318 223 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-208ENST00000464001 TLX2O43763 284 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-208ENST00000464001 PRAMEF11O60813 436 aa3.53□□□□□ -1.84
ITGB1-208ENST00000464001 ATP9AO75110 1047 aa3.53□□□□□ -1.84
ITGB1-208ENST00000464001 SRSF10O75494 262 aaKnown RBP3.53□□□□□ -1.84
ITGB1-208ENST00000464001 PRKRAO75569 313 aaKnown RBP3.53□□□□□ -1.84
ITGB1-208ENST00000464001 TOM1L1O75674 476 aa3.53□□□□□ -1.84
ITGB1-208ENST00000464001 DUS4LO95620 317 aaKnown RBP3.53□□□□□ -1.84
ITGB1-208ENST00000464001 IL1BP01584 269 aa3.53□□□□□ -1.84
ITGB1-208ENST00000464001 IGHEP01854 428 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms