RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 LOC102723996A0A087X1L8 192 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 ATP8B1O43520 1251 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 DNAJB6O75190 326 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 EEDO75530 441 aaKnown RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 HPP00738 406 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 NR2F6P10588 404 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 SFTPCP11686 197 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 ICAM2P13598 275 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 SERPINB3P29508 390 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 GSTM5P46439 218 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 WDR4P57081 412 aaKnown RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 HMGCS1Q01581 520 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 ACTN3Q08043 901 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 TBL3Q12788 808 aaKnown RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 AIMP2Q13155 320 aaKnown RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 DCAF10Q5QP82 559 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 NDUFAF7Q7L592 441 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 CPEB2Q7Z5Q1 589 aaKnown RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 TWIST2Q8WVJ9 160 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 DYDC1Q8WWB3 177 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 TANKQ92844 425 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 UBL7Q96S82 380 aaPredicted RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 RPF2Q9H7B2 306 aaKnown RBP18.62■□□□□ 0.57
COL9A3-204ENST00000463487 KCMF1Q9P0J7 381 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 RAP2CQ9Y3L5 183 aa18.62■□□□□ 0.57
COL9A3-204ENST00000463487 GNG14A0A1W2PPG7 69 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 A0A1W2PQ72 361 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 FAM227AF5H4B4 570 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 MKRN2OSH3BPM6 223 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 CYR61O00622 381 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 CTNSO60931 367 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 OR4D2P58180 307 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 TRA2BP62995 288 aaKnown RBP18.61■□□□□ 0.57
COL9A3-204ENST00000463487 PPP2R2AP63151 447 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 STX4Q12846 297 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 BIKQ13323 160 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 SERTAD2Q14140 314 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 MRM1Q6IN84 353 aaKnown RBP18.61■□□□□ 0.57
COL9A3-204ENST00000463487 SCIMPQ6UWF3 145 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 ANKRD37Q7Z713 158 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 FAM76AQ8TAV0 307 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 CHTF18Q8WVB6 975 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 C8orf44Q96CB5 159 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 WBP1Q96G27 269 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 TUBB6Q9BUF5 446 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 FAIM2Q9BWQ8 316 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 ZNF700Q9H0M5 742 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 ADNPQ9H2P0 1102 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 MANSC1Q9H8J5 431 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 TNFRSF12AQ9NP84 129 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 THAP1Q9NVV9 213 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 ZNF446Q9NWS9 450 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 MCM8Q9UJA3 840 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 DNAJC15Q9Y5T4 150 aa18.61■□□□□ 0.57
COL9A3-204ENST00000463487 IGHV1-45A0A0A0MS14 117 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 PROM1O43490 865 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 TMPRSS11DO60235 418 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 PCDH7O60245 1069 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 GBAP04062 536 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 MAOAP21397 527 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 TPP2P29144 1249 aaPredicted RBP18.6■□□□□ 0.57
COL9A3-204ENST00000463487 POLE2P56282 527 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 EEF1A2Q05639 463 aaKnown RBP18.6■□□□□ 0.57
COL9A3-204ENST00000463487 BTKQ06187 659 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 NR6A1Q15406 480 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 CSF3RQ99062 836 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 LPAR4Q99677 370 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 ZDHHC2Q9UIJ5 367 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 TUBD1Q9UJT1 453 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 ASB4Q9Y574 426 aa18.6■□□□□ 0.57
COL9A3-204ENST00000463487 TCRBV16S1A1N1A0A5B0 115 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 LYPLA1O75608 230 aaPredicted RBP18.59■□□□□ 0.57
COL9A3-204ENST00000463487 COX6A1P12074 109 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 CHN1P15882 459 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 PRPH2P23942 346 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 TIA1P31483 386 aaKnown RBP eCLIP18.59■□□□□ 0.57
COL9A3-204ENST00000463487 RPL14P50914 215 aaKnown RBP18.59■□□□□ 0.57
COL9A3-204ENST00000463487 HNRNPH2P55795 449 aaKnown RBP18.59■□□□□ 0.57
COL9A3-204ENST00000463487 BTG2P78543 158 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 BST1Q10588 318 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 EXT1Q16394 746 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 SFT2D3Q587I9 215 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 OR52E8Q6IFG1 317 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 GALNT18Q6P9A2 607 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 LANCL3Q6ZV70 420 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 TMEM151BQ8IW70 566 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 SCUBE1Q8IWY4 988 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 KBTBD2Q8IY47 623 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 TTC9Q92623 222 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 TSLPQ969D9 159 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 LRTM1Q9HBL6 345 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 ZNF160Q9HCG1 818 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 MED4Q9NPJ6 270 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 INTS9Q9NV88 658 aaKnown RBP18.59■□□□□ 0.57
COL9A3-204ENST00000463487 C1orf109Q9NX04 203 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 SIRT5Q9NXA8 310 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 ATG4BQ9Y4P1 393 aa18.59■□□□□ 0.57
COL9A3-204ENST00000463487 ZFHX4Q86UP3 3567 aa18.58■□□□□ 0.57
COL9A3-204ENST00000463487 IGKV3D-11A0A0A0MRZ8 115 aa18.58■□□□□ 0.56
COL9A3-204ENST00000463487 C1orf226A1L170 272 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms