RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 EEF1DP29692 281 aaKnown RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 AKT2P31751 481 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 CCR10P46092 362 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 RPL14P50914 215 aaKnown RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 PGDP52209 483 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ALDH18A1P54886 795 aaKnown RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 HERVK_113P63132 956 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ARHGAP8P85298 464 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 PLOD1Q02809 727 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ABRQ12979 859 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 PRKAA1Q13131 559 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZSCAN26Q16670 478 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 PPP1R3AQ16821 1122 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF658BQ4V348 819 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 SBSNQ6UWP8 590 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 RPS27LQ71UM5 84 aaKnown RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 LRRTM4Q86VH4 590 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF547Q8IVP9 402 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 SPEM1Q8N4L4 309 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF781Q8N8C0 355 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 DENND6BQ8NEG7 585 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 OR2L2Q8NH16 312 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 C10orf82Q8WW14 230 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 CLDN23Q96B33 292 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZC3H10Q96K80 434 aaKnown RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 EGFL8Q99944 293 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 TRMOQ9BU70 441 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 DUSP26Q9BV47 211 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ERVK-6Q9BXR3 956 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 KRTAP4-11Q9BYQ6 195 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 SHCBP1LQ9BZQ2 653 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF700Q9H0M5 742 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 KCNK13Q9HB14 408 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 PARVBQ9HBI1 364 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 EML4Q9HC35 981 aaKnown RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ASB6Q9NWX5 421 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 DLL3Q9NYJ7 618 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 WSB2Q9NYS7 404 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 MARCOQ9UEW3 520 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-204ENST00000462658 ZNHIT2Q9UHR6 403 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 PDE10AQ9Y233 779 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 USH1CQ9Y6N9 552 aa7.06□□□□□ -1.28
UBE4B-204ENST00000462658 IGHV1OR15-9A0A0B4J2B8 117 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 PABPN1LA6NDY0 278 aaKnown RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CLCA1A8K7I4 914 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 GFYI3L273 518 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 KMOO15229 486 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 LATO43561 262 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 APBB3O95704 486 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 ANXA5P08758 320 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 HIST1H2AGP0C0S8 130 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 TSPAN8P19075 237 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 HIST1H2ADP20671 130 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CYP2A7P20853 494 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 HNRNPA2B1P22626 353 aaKnown RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 PDHA2P29803 388 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 MAPK9P45984 424 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 RPS9P46781 194 aaKnown RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 AGTR2P50052 363 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CCT8P50990 548 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CCR3P51677 355 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CCR5P51681 352 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 AQP5P55064 265 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CDH13P55290 713 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CLDN2P57739 230 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 NAA20P61599 178 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CDKL1Q00532 357 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 GALNT1Q10472 559 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 PHKG1Q16816 387 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 FBXO48Q5FWF7 155 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CDKL4Q5MAI5 379 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF362Q5T0B9 420 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 SULT1C3Q6IMI6 304 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CUZD1Q86UP6 607 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 AMZ2Q86W34 360 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 SLC22A15Q8IZD6 547 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 CFAP61Q8NHU2 1237 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 HM13Q8TCT9 377 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 AGR3Q8TD06 166 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 MCOLN3Q8TDD5 553 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 TRPC4APQ8TEL6 797 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 RLN3Q8WXF3 142 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 ESAMQ96AP7 390 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 BMFQ96LC9 184 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 FOPNLQ96NB1 174 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 SIKE1Q9BRV8 207 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 H2AFJQ9BTM1 129 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 GPR174Q9BXC1 333 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 TMEM120AQ9BXJ8 343 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 KLK15Q9H2R5 256 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 PRDM13Q9H4Q3 707 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 C6orf106Q9H6K1 298 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-204ENST00000462658 RMI1Q9H9A7 625 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 COG4Q9H9E3 785 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 EBF2Q9HAK2 575 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 SLC23A2Q9UGH3 650 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 ZDHHC2Q9UIJ5 367 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 MOSPD1Q9UJG1 213 aa7.05□□□□□ -1.28
UBE4B-204ENST00000462658 HAO1Q9UJM8 370 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms