RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 EEF1DP29692 281 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 CASP2P42575 452 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 MSH2P43246 934 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 SMSP52788 366 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 CASP6P55212 293 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 VSNL1P62760 191 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 ALDH6A1Q02252 535 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 DOC2AQ14183 400 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 SLC29A2Q14542 456 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 ABRAXAS2Q15018 415 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 TBCCQ15814 346 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 EXT1Q16394 746 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 PDK4Q16654 411 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 FAM83EQ2M2I3 478 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 KRTCAP3Q53RY4 240 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 SFT2D3Q587I9 215 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 MFSD4BQ5TF39 518 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 PAPD4Q6PIY7 484 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 C3P1Q6ZMU1 363 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 TIFABQ6ZNK6 161 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 TAOK1Q7L7X3 1001 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 CDH24Q86UP0 819 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 DOLPP1Q86YN1 238 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 LGI4Q8N135 537 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 KIF2BQ8N4N8 673 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 MARVELD2Q8N4S9 558 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 CPSF7Q8N684 471 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 SNX31Q8N9S9 440 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 M1APQ8TC57 530 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 AGAP11Q8TF27 550 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 PHF10Q8WUB8 498 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 UTP23Q9BRU9 249 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 NT5DC2Q9H857 520 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 KCNK13Q9HB14 408 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 ANKHQ9HCJ1 492 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 XPR1Q9UBH6 696 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 FETUBQ9UGM5 382 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 ITGB1BP2Q9UKP3 347 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZNF490Q9ULM2 529 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 NAALAD2Q9Y3Q0 740 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 ZANQ9Y493 2812 aa7.41□□□□□ -1.22
CDC42BPA-210ENST00000462553 SYCE1LA8MT33 242 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ESPNB1AK53 854 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 CLGNO14967 610 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ASNA1O43681 348 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 NME2P1O60361 137 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 SIX3O95343 332 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 S100BP04271 92 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 SERPIND1P05546 499 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 SP1P08047 785 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 SERPINA6P08185 405 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ESRRAP11474 423 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ALOX12P18054 663 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 NME2P22392 152 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TPP2P29144 1249 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PTGER1P34995 402 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ALDH18A1P54886 795 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 SLC26A5P58743 744 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 RAB8AP61006 207 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 OLR1P78380 273 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TLE4Q04727 773 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 RGS1Q08116 209 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 CHIT1Q13231 466 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 HERC3Q15034 1050 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 RBBP5Q15291 538 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PCBP2Q15366 365 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PFKFB4Q16877 469 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TSNAXIP1Q2TAA8 658 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ADPRMQ3LIE5 342 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 DEFB134Q4QY38 66 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TOR1AIP1Q5JTV8 583 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 FAM219BQ5XKK7 198 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TMIGD1Q6UXZ0 262 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 SH2D5Q6ZV89 423 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PTGR2Q8N8N7 351 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TMEM178AQ8NBL3 297 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PLPP5Q8NEB5 264 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TRPV3Q8NET8 790 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 ELP5Q8TE02 316 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 GAL3ST3Q96A11 431 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 MS4A6EQ96DS6 147 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PTCD3Q96EY7 689 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PEX11GQ96HA9 241 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 QRFPRQ96P65 431 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 OR1F2PQ96R84 312 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PITHD1Q9GZP4 211 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 RHBGQ9H310 441 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 TRIM45Q9H8W5 580 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 MCCC2Q9HCC0 563 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 CPSF2Q9P2I0 782 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 PSMC3IPQ9P2W1 217 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 OPTCQ9UBM4 332 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 HRH3Q9Y5N1 445 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 IKBKGQ9Y6K9 419 aa7.4□□□□□ -1.22
CDC42BPA-210ENST00000462553 EXPH5Q8NEV8 1989 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms