RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 KHDRBS2Q5VWX1 349 aaKnown RBP12.34□□□□□ -0.43
C9orf3-210ENST00000462125 SLC25A25Q6KCM7 469 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 ZNF227Q86WZ6 799 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 C7orf57Q8NEG2 295 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 RELTQ969Z4 430 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 CSF3RQ99062 836 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 DEFB126Q9BYW3 111 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 VPS11Q9H270 941 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 COPS7BQ9H9Q2 264 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-210ENST00000462125 ANKRD10Q9NXR5 420 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 LRFN1Q9P244 771 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 ZNF223Q9UK11 482 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-210ENST00000462125 PCDHGA11Q9Y5H2 935 aa12.34□□□□□ -0.43
C9orf3-210ENST00000462125 A0A1B0GUH1 482 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 LRRC14BA6NHZ5 514 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 LRRTM2O43300 516 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 SASH3O75995 380 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 GFAPP14136 432 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 EEF1DP29692 281 aaKnown RBP12.33□□□□□ -0.44
C9orf3-210ENST00000462125 PPP2R1BP30154 601 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 CYB561P49447 251 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 HLCSP50747 726 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.44
C9orf3-210ENST00000462125 GTF2H2Q13888 395 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 ELAVL1Q15717 326 aaKnown RBP12.33□□□□□ -0.44
C9orf3-210ENST00000462125 AP5B1Q2VPB7 878 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 OR4C11Q6IEV9 310 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 GTF2H2CQ6P1K8 395 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 L3MBTL4Q8NA19 623 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 FAM47BQ8NA70 645 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 TMEM178AQ8NBL3 297 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 HUS1BQ8NHY5 278 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 DCAKDQ8WVC6 231 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 VMP1Q96GC9 406 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 MAPKAP1Q9BPZ7 522 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 ALOXE3Q9BYJ1 711 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 OR51B5Q9H339 312 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 IPPKQ9H8X2 491 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 ADAP2Q9NPF8 381 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 PNO1Q9NRX1 252 aaKnown RBP12.33□□□□□ -0.44
C9orf3-210ENST00000462125 ZNF358Q9NW07 568 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 TMCO1Q9UM00 188 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 ANGPTL3Q9Y5C1 460 aa12.33□□□□□ -0.44
C9orf3-210ENST00000462125 ZGRF1Q86YA3 2104 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 A0A087WUV0 522 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 STX16-NPEPL1H3BU86 382 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 RTCAO00442 366 aaKnown RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 STX16O14662 325 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 KRT38O76015 456 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 WISP2O76076 250 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 ZFAND5O76080 213 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 SIX3O95343 332 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 PCNAP12004 261 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 PTX3P26022 381 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 PIK3CGP48736 1102 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 ST13P50502 369 aaKnown RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 GABPB1Q06547 395 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 SLAMF1Q13291 335 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 CUL3Q13618 768 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 SERTAD2Q14140 314 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 KRTCAP3Q53RY4 240 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 GFRALQ6UXV0 394 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 TAOK1Q7L7X3 1001 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 GOLGA7Q7Z5G4 137 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 TMEM132CQ8N3T6 1108 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 ZCCHC7Q8N3Z6 543 aaKnown RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 TMEM151AQ8N4L1 468 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 MORN4Q8NDC4 146 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 WDR20Q8TBZ3 569 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 THAP3Q8WTV1 239 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 RGMAQ96B86 450 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 ANKRD9Q96BM1 317 aaPredicted RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 HES7Q9BYE0 225 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 ACTR8Q9H981 624 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 DMRT3Q9NQL9 472 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 KLHL1Q9NR64 748 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 MS4A12Q9NXJ0 267 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 SEC14L3Q9UDX4 400 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 PPT2Q9UMR5 302 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 NFU1Q9UMS0 254 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 IKBKGQ9Y6K9 419 aa12.32□□□□□ -0.44
C9orf3-210ENST00000462125 SPTAN1Q13813 2472 aaKnown RBP12.32□□□□□ -0.44
C9orf3-210ENST00000462125 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 POC1B-GALNT4F8VUJ3 575 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 FOXE1O00358 373 aaPredicted RBP12.31□□□□□ -0.44
C9orf3-210ENST00000462125 PLPP1O14494 284 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 FCHO1O14526 889 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 OR7A17O14581 309 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 NME2P1O60361 137 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 UNC5CO95185 931 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 CLDN1O95832 211 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 ABHD2P08910 425 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 NME2P22392 152 aa12.31□□□□□ -0.44
C9orf3-210ENST00000462125 KCNK10P57789 538 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms