RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 DEFB126Q9BYW3 111 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 ACTR8Q9H981 624 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 KCMF1Q9P0J7 381 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 PLEKHB1Q9UF11 243 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-207ENST00000461550 TBK1Q9UHD2 729 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 ZNF180Q9UJW8 692 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 MRPS33Q9Y291 106 aaKnown RBP16.29■□□□□ 0.2
MRPL28-207ENST00000461550 UNC79Q9P2D8 2635 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 CROCCQ5TZA2 2017 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 KLK8O60259 260 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 SSR2P43308 183 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 ID2Q02363 134 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 PCDH1Q08174 1060 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 GTF2H2Q13888 395 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 KHDRBS2Q5VWX1 349 aaKnown RBP16.29■□□□□ 0.2
MRPL28-207ENST00000461550 GTF2H2CQ6P1K8 395 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 PTGR2Q8N8N7 351 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-207ENST00000461550 B3GNT7Q8NFL0 401 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 NCLNQ969V3 563 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 PHF21BQ96EK2 531 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 TBCDQ9BTW9 1192 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 DMRT3Q9NQL9 472 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 LRFN1Q9P244 771 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 ZNF223Q9UK11 482 aaPredicted RBP16.29■□□□□ 0.2
MRPL28-207ENST00000461550 FBXW2Q9UKT8 454 aa16.29■□□□□ 0.2
MRPL28-207ENST00000461550 LRRTM2O43300 516 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 LDB3O75112 727 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 NEURL1O76050 574 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 DDAH2O95865 285 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 IFNA16P05015 189 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 SNRPAP09012 282 aaKnown RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 HIST1H1TP22492 207 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 EEF1DP29692 281 aaKnown RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 PIK3CGP48736 1102 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 MLF1P58340 268 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 PCBP2Q15366 365 aaKnown RBP eCLIP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 CPSF6Q16630 551 aaKnown RBP eCLIP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 AP5B1Q2VPB7 878 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 TMEM35AQ53FP2 167 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 LGSNQ5TDP6 509 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 GFRALQ6UXV0 394 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 CHSY3Q70JA7 882 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 LGI4Q8N135 537 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 SRFBP1Q8NEF9 429 aaKnown RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 EPS8L3Q8TE67 593 aaKnown RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 ISL2Q96A47 359 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 CMTM7Q96FZ5 175 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 TSPAN10Q9H1Z9 355 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 ADAP2Q9NPF8 381 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 PSMC3IPQ9P2W1 217 aaPredicted RBP16.28■□□□□ 0.2
MRPL28-207ENST00000461550 XPR1Q9UBH6 696 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 RNF11Q9Y3C5 154 aa16.28■□□□□ 0.2
MRPL28-207ENST00000461550 MYO7BQ6PIF6 2116 aa16.27■□□□□ 0.2
MRPL28-207ENST00000461550 TLDC2A0PJX2 215 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 CCDC189A1A4V9 331 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 ERLIN1O75477 346 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 UNC5CO95185 931 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 CRYABP02511 175 aaKnown RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 CD46P15529 392 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 H2AFXP16104 143 aaPredicted RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 CNTFP26441 200 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 ARL1P40616 181 aaPredicted RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 CLCN2P51788 898 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 RAP1GDS1P52306 607 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 RPS13P62277 151 aaKnown RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 C4orf17Q53FE4 359 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 C1QL3Q5VWW1 255 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 C16orf47Q6ZP98 133 aaPredicted RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 GALNTL5Q7Z4T8 443 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 ZBTB9Q96C00 473 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 SCMH1Q96GD3 660 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 NSUN5Q96P11 429 aaKnown RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 CDK15Q96Q40 435 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 ROGDIQ9GZN7 287 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 LIN28AQ9H9Z2 209 aaKnown RBP16.27■□□□□ 0.19
MRPL28-207ENST00000461550 LYRM4Q9HD34 91 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 FETUBQ9UGM5 382 aa16.27■□□□□ 0.19
MRPL28-207ENST00000461550 IQANK1A0A1B0GTG1 560 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 WIPF3A6NGB9 483 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 FOXO6A8MYZ6 492 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 PLPP1O14494 284 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 PRKNO60260 465 aaPredicted RBP16.26■□□□□ 0.19
MRPL28-207ENST00000461550 CTNSO60931 367 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 PRKRAO75569 313 aaKnown RBP16.26■□□□□ 0.19
MRPL28-207ENST00000461550 SLC25A12O75746 678 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 CLDN1O95832 211 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 SP1P08047 785 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 SERPINB1P30740 379 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 NEK2P51955 445 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 IFFO1Q0D2I5 559 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 STX4Q12846 297 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 SLAMF1Q13291 335 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 RCN2Q14257 317 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 TERF2Q15554 542 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 MAPKAPK3Q16644 382 aa16.26■□□□□ 0.19
MRPL28-207ENST00000461550 DEPDC1Q5TB30 811 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms