RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TMEM35AQ53FP2 167 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 MED27Q6P2C8 311 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 ZNF793Q6ZN11 406 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 CCDC91Q7Z6B0 441 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 LAS2Q8IYD9 372 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 ZFP62Q8NB50 900 aaPredicted RBP21.19■□□□□ 0.98
PTPN4-207ENST00000460162 MORN4Q8NDC4 146 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 C16orf52Q8NHV5 167 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 FBF1Q8TES7 1133 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 AGAP11Q8TF27 550 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 TIMMDC1Q9NPL8 285 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 OPTCQ9UBM4 332 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 VTI1BQ9UEU0 232 aa21.19■□□□□ 0.98
PTPN4-207ENST00000460162 A8MVJ9 347 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 E9PLN8 166 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 K7EPI3 171 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 PEX1O43933 1283 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 PRKNO60260 465 aaPredicted RBP21.18■□□□□ 0.98
PTPN4-207ENST00000460162 FAM155BO75949 473 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 TUBB4AP04350 444 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 PTGER1P34995 402 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 GMPRP36959 345 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 STX4Q12846 297 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 DLG1Q12959 904 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 BMPR2Q13873 1038 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 ZDHHC24Q6UX98 284 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 GDF7Q7Z4P5 450 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 MDGA2Q7Z553 956 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 UBE3DQ7Z6J8 389 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 C7orf57Q8NEG2 295 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 VKORC1Q9BQB6 163 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 IGSF5Q9NSI5 407 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 HPF1Q9NWY4 346 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 KCMF1Q9P0J7 381 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 MYOTQ9UBF9 498 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 ERVK-11Q9UQG0 969 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 FBN2P35556 2912 aa21.18■□□□□ 0.98
PTPN4-207ENST00000460162 PKDREJQ9NTG1 2253 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 CCDC189A1A4V9 331 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 UBXN8O00124 270 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 OR2J2O76002 312 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 CLDN14O95500 239 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 COX6B1P14854 86 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 HIST1H1TP22492 207 aaPredicted RBP21.17■□□□□ 0.98
PTPN4-207ENST00000460162 ATP5A1P25705 553 aaKnown RBP21.17■□□□□ 0.98
PTPN4-207ENST00000460162 ETF1P62495 437 aaKnown RBP21.17■□□□□ 0.98
PTPN4-207ENST00000460162 HSDL2Q6YN16 418 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 ZNF572Q7Z3I7 529 aaPredicted RBP21.17■□□□□ 0.98
PTPN4-207ENST00000460162 FGD2Q7Z6J4 655 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 DOLPP1Q86YN1 238 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 SRRM1Q8IYB3 904 aaKnown RBP21.17■□□□□ 0.98
PTPN4-207ENST00000460162 ACOT4Q8N9L9 421 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 PSD4Q8NDX1 1056 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 ASB15Q8WXK1 588 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 PHF12Q96QT6 1004 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 ALOXE3Q9BYJ1 711 aa21.17■□□□□ 0.98
PTPN4-207ENST00000460162 TMEM200CA6NKL6 621 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 SYCE1LA8MT33 242 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 HS6ST1O60243 411 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 PCNAP12004 261 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 RFC3P40938 356 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 SSR2P43308 183 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 CMPK2Q5EBM0 449 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 KHDRBS2Q5VWX1 349 aaKnown RBP21.16■□□□□ 0.98
PTPN4-207ENST00000460162 GRHL2Q6ISB3 625 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 CHSY3Q70JA7 882 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 OR7G3Q8NG95 312 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 OR8K3Q8NH51 312 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 RHEBL1Q8TAI7 183 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 PTPMT1Q8WUK0 201 aaPredicted RBP21.16■□□□□ 0.98
PTPN4-207ENST00000460162 CMTM7Q96FZ5 175 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 RASL10BQ96S79 203 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 DMRTA2Q96SC8 542 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 MAPKAP1Q9BPZ7 522 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 PRM3Q9NNZ6 103 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 ADGRE2Q9UHX3 823 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 ACOT9Q9Y305 439 aa21.16■□□□□ 0.98
PTPN4-207ENST00000460162 A0A087X1B8 175 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 RTCAO00442 366 aaKnown RBP21.15■□□□□ 0.98
PTPN4-207ENST00000460162 LDB3O75112 727 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 EPB42P16452 691 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 PTGS2P35354 604 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 GPR85P60893 370 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 GUCY2DQ02846 1103 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 AP5B1Q2VPB7 878 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 CENPLQ8N0S6 344 aaPredicted RBP21.15■□□□□ 0.98
PTPN4-207ENST00000460162 FAM57AQ8TBR7 257 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 MTFMTQ96DP5 389 aaKnown RBP21.15■□□□□ 0.98
PTPN4-207ENST00000460162 OR8D2Q9GZM6 311 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 PLSCR2Q9NRY7 297 aa21.15■□□□□ 0.98
PTPN4-207ENST00000460162 A0A1B0GTH9 108 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 C17orf105B2RV13 164 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 ADAM10O14672 748 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 ZNHIT1O43257 154 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 MTHFD2P13995 350 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 CPN2P22792 545 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 SOX3P41225 446 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 HK2P52789 917 aa21.14■□□□□ 0.97
PTPN4-207ENST00000460162 IGLV3-21P80748 117 aaPredicted RBP21.14■□□□□ 0.97
PTPN4-207ENST00000460162 SETDB1Q15047 1291 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms