RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SYNDIG1LA6NDD5 238 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 KLRC4-KLRK1H3BQV0 150 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 TGFBR3LH3BV60 316 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 CDC40O60508 579 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 ZFAND5O76080 213 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 TNNI3P19429 210 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 RFC3P40938 356 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 SSR4P51571 173 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 EFTUD2Q15029 972 aaKnown RBP eCLIP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 ADPRMQ3LIE5 342 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 MYLK4Q86YV6 388 aaPredicted RBP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 SIAH3Q8IW03 269 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 TMEM132CQ8N3T6 1108 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 POGLUT1Q8NBL1 392 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 SRFBP1Q8NEF9 429 aaKnown RBP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 FBXO25Q8TCJ0 367 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 UBE2E3Q969T4 207 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 TRIM44Q96DX7 344 aaPredicted RBP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 PHACTR1Q9C0D0 580 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 PTBP2Q9UKA9 531 aaKnown RBP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNF490Q9ULM2 529 aaPredicted RBP14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 DAPP1Q9UN19 280 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 ANGPTL3Q9Y5C1 460 aa14.67□□□□□ -0.06
CHCHD3-204ENST00000457942 NIPBLQ6KC79 2804 aaeCLIP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 A8MVJ9 347 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 UBXN8O00124 270 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 PRRG2O14669 202 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 PRAMEF4O60810 478 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 URI1O94763 535 aaPredicted RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 CLDN14O95500 239 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 LTA4HP09960 611 aaKnown RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 CD22P20273 847 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 CRABP2P29373 138 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 SSR2P43308 183 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 GPR85P60893 370 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 NAB1Q13506 487 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 DDX39BQ13838 428 aaKnown RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 ELAVL1Q15717 326 aaKnown RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 UAP1Q16222 522 aaPredicted RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 PRAMEF9Q5VWM5 478 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 MED27Q6P2C8 311 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 XKRXQ6PP77 449 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 CYS1Q717R9 158 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNF227Q86WZ6 799 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 SULF2Q8IWU5 870 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 ASB15Q8WXK1 588 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 DAZLQ92904 295 aaKnown RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 WDR34Q96EX3 536 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 UBXN10Q96LJ8 280 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 MS4A8Q9BY19 250 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 OR8D2Q9GZM6 311 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 TRIM45Q9H8W5 580 aaPredicted RBP14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 TIMMDC1Q9NPL8 285 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 HPF1Q9NWY4 346 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 ASB1Q9Y576 335 aa14.66□□□□□ -0.06
CHCHD3-204ENST00000457942 K7EPI3 171 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 SAP18O00422 153 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 RTCAO00442 366 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 PEX1O43933 1283 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 KERAO60938 352 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 TBX6O95947 436 aaPredicted RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 SLC35E2BP0CK96 405 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 PTGER1P34995 402 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 RAP1GDS1P52306 607 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 TBCCQ15814 346 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 AP5B1Q2VPB7 878 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 RNFT1Q5M7Z0 435 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 C3P1Q6ZMU1 363 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 MEX3BQ6ZN04 569 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 Q6ZPB1 254 aaPredicted RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 CHSY3Q70JA7 882 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 EID3Q8N140 333 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 OR14A16Q8NHC5 309 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 AGAP11Q8TF27 550 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 CENPKQ9BS16 269 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 TBCDQ9BTW9 1192 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 ALOXE3Q9BYJ1 711 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 LIN28AQ9H9Z2 209 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 KCMF1Q9P0J7 381 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNF223Q9UK11 482 aaPredicted RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 YARS2Q9Y2Z4 477 aaKnown RBP14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 MEMO1Q9Y316 297 aa14.65□□□□□ -0.06
CHCHD3-204ENST00000457942 NCOA6Q14686 2063 aaPredicted RBP14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 ESYT3A0FGR9 886 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 SYCE1LA8MT33 242 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 C17orf105B2RV13 164 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 WWP2O00308 870 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 CYR61O00622 381 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 HS6ST1O60243 411 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 PRKNO60260 465 aaPredicted RBP14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 CTNSO60931 367 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 LDB3O75112 727 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 OR2J2O76002 312 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 TGFB1P01137 390 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 C1QAP02745 245 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 TUBB4AP04350 444 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 TPOP07202 933 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 GFAPP14136 432 aa14.64□□□□□ -0.07
CHCHD3-204ENST00000457942 EPB42P16452 691 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms