RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 NCR3LG1Q68D85 454 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SLC9A4Q6AI14 798 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 LRRC8BQ6P9F7 803 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 C5orf46Q6UWT4 87 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PGAP1Q75T13 922 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SFR1Q86XK3 245 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 TMC8Q8IU68 726 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MMAAQ8IVH4 418 aaKnown RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 UBQLNLQ8IYU4 475 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 KIRREL3Q8IZU9 778 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CYP4Z2PQ8N1L4 340 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 C17orf78Q8N4C9 275 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CCDC185Q8N715 623 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ANKRD44Q8N8A2 993 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 VGLL2Q8N8G2 317 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SLC37A3Q8NCC5 494 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CCDC197Q8NCU1 140 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CPEB3Q8NE35 698 aaKnown RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 FBXL13Q8NEE6 735 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MDGA1Q8NFP4 955 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 OR52B4Q8NGK2 314 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 OR4C15Q8NGM1 316 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 OR13C9Q8NGT0 318 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 RNASE8Q8TDE3 154 aaKnown RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 KBTBD7Q8WVZ9 684 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 DNASE1L2Q92874 299 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 BORCS5Q969J3 196 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ABTB1Q969K4 478 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 TOP1MTQ969P6 601 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 LENG9Q96B70 501 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 REPS1Q96D71 796 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PGAM5Q96HS1 289 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 RAX2Q96IS3 184 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 C16orf92Q96LL3 132 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 LINC00615Q96LM1 132 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 SLITRK1Q96PX8 696 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PAFAH2Q99487 392 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CTRCQ99895 268 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 NAT9Q9BTE0 207 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ANO3Q9BYT9 981 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ANKRD60Q9BZ19 345 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 UBXN6Q9BZV1 441 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 OR2B2Q9GZK3 357 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 HAPLN2Q9GZV7 340 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 METTL9Q9H1A3 318 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 C11orf49Q9H6J7 331 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ZMAT4Q9H898 229 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MED20Q9H944 212 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 GLOD4Q9HC38 313 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CSNK1G1Q9HCP0 422 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 TMEM248Q9NWD8 314 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CD274Q9NZQ7 290 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 SLC25A10Q9UBX3 287 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 MSRAQ9UJ68 235 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CRLS1Q9UJA2 301 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 STOML2Q9UJZ1 356 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 UTS2RQ9UKP6 389 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 TBC1D24Q9ULP9 559 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PLA2G4CQ9UP65 541 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 ERVW-1Q9UQF0 538 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PRG3Q9Y2Y8 225 aaPredicted RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 STARD10Q9Y365 291 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 RBMX2Q9Y388 322 aaKnown RBP5.16□□□□□ -1.58
VPS41-209ENST00000457055 GRIP1Q9Y3R0 1128 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 PKP3Q9Y446 797 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 INSL6Q9Y581 213 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 FKBP7Q9Y680 259 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 GRIN2DO15399 1336 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 MAST3O60307 1309 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 RFX7Q2KHR2 1363 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CCDC7Q96M83 1385 aa5.16□□□□□ -1.58
VPS41-209ENST00000457055 CACNA1SQ13698 1873 aa5.15□□□□□ -1.58
VPS41-209ENST00000457055 SPATA31E1Q6ZUB1 1445 aa5.15□□□□□ -1.58
VPS41-209ENST00000457055 TRIOBPQ9H2D6 2365 aa5.15□□□□□ -1.58
VPS41-209ENST00000457055 H7C4K7 107 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 FBP2O00757 339 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ABCD4O14678 606 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ANKRD28O15084 1053 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ADAMDEC1O15204 470 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 TM9SF1O15321 606 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 STX7O15400 261 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 TSPAN2O60636 221 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CNOT3O75175 753 aaKnown RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 OAZ2O95190 189 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 GLP2RO95838 553 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 RLN1P04808 185 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 GNAI3P08754 354 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CD63P08962 238 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SBK2P0C263 348 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 STAG3L1P0CL83 205 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 ENO3P13929 434 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 XRCC1P18887 633 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 F8A1P23610 371 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 PRKCHP24723 683 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SERPINA4P29622 427 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CRABP1P29762 137 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 CDH5P33151 784 aaPredicted RBP5.15□□□□□ -1.59
VPS41-209ENST00000457055 DLSTP36957 453 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 FDFT1P37268 417 aa5.15□□□□□ -1.59
VPS41-209ENST00000457055 SLCO1A2P46721 670 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms