RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RFPL3O75679 317 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 CSPG5O95196 566 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 IFNGR1P15260 489 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 FRKP42685 505 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 NKX3-2P78367 333 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM53Q6P2H8 277 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 PGBD2Q6P3X8 592 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 GPR142Q7Z601 462 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 SLC41A1Q8IVJ1 513 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 TGM7Q96PF1 710 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 GFM1Q96RP9 751 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 DUSP9Q99956 384 aaKnown RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF490Q9ULM2 529 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-204ENST00000455883 DUSP10Q9Y6W6 482 aa5.04□□□□□ -1.6
CSMD3-204ENST00000455883 E5RJQ4 531 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ITGAMP11215 1152 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CDK3Q00526 305 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FLI1Q01543 452 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TARDBPQ13148 414 aaKnown RBP eCLIP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GK2Q14410 553 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 COX19Q49B96 90 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 C14orf28Q4W4Y0 310 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RNF220Q5VTB9 566 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF613Q6PF04 617 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GSG1LQ6UXU4 331 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 NKAIN3Q8N8D7 197 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC2A12Q8TD20 617 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 NEK7Q8TDX7 302 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PYCR2Q96C36 320 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC22A12Q96S37 553 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 KCNH6Q9H252 994 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 DOCK5Q9H7D0 1870 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FUOMA2VDF0 154 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TMEM200CA6NKL6 621 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLITRK3O94933 977 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 DIRAS1O95057 198 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC26A5P58743 744 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RING1Q06587 406 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ARFRP1Q13795 201 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ENPP2Q13822 863 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 HNF4GQ14541 408 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 DECR1Q16698 335 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 AGAP6Q5VW22 663 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 MLIPQ5VWP3 458 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FAM117BQ6P1L5 589 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TEX26Q8N6G2 289 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PPP1R35Q8TAP8 253 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SFXN5Q8TD22 340 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 AGAP4Q96P64 663 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TSSK2Q96PF2 358 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TREX2Q9BQ50 279 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 WDR55Q9H6Y2 383 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PTGES2Q9H7Z7 377 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 VRTNQ9H8Y1 702 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SCPEP1Q9HB40 452 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SGK2Q9HBY8 427 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TRPM3Q9HCF6 1732 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GREB1Q4ZG55 1949 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 A8MVJ9 347 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 EI24O14681 340 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC37A4O43826 429 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 EOMESO95936 686 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GALP22466 123 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 IL12BP29460 328 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 H3F3AP84243 136 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ARSKQ6UWY0 536 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RNF19BQ6ZMZ0 732 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 LINGO2Q7L985 606 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 C6orf120Q7Z4R8 191 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OR9A4Q8NGU2 314 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PIGKQ92643 395 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SNX27Q96L92 541 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SPATC1LQ9H0A9 340 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OSGEPL1Q9H4B0 414 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RPF2Q9H7B2 306 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TEX10Q9NXF1 929 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 A0A0A6YYH2 397 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OR6C70A6NIJ9 312 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 A6NJ64 397 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TAAR5O14804 337 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CILPO75339 1184 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 MED6O75586 246 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GLAP06280 429 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 METTL15P1P0C7V9 234 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CCKBRP32239 447 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GHRHRQ02643 423 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SERINC3Q13530 473 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 HECTD2Q5U5R9 776 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SUSD4Q5VX71 490 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC39A4Q6P5W5 647 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RBMS3Q6XE24 437 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 MCEMP1Q8IX19 187 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SYNPOQ8N3V7 929 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 BPIFB1Q8TDL5 484 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZDHHC12Q96GR4 267 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SFXN2Q96NB2 322 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CASD1Q96PB1 797 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ABCG5Q9H222 651 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OR52A5Q9H2C5 316 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 IPPKQ9H8X2 491 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms