RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 CNOT10Q9H9A5 744 aaKnown RBP7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 IL1RL2Q9HB29 575 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SACM1LQ9NTJ5 587 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 GPRC5BQ9NZH0 403 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 B4GALT7Q9UBV7 327 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 COPS7AQ9UBW8 275 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ACAD8Q9UKU7 415 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC22A14Q9Y267 594 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 PCDHGB3Q9Y5G1 929 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ARHGAP21Q5T5U3 1957 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 EML6Q6ZMW3 1958 aa7.45□□□□□ -1.22
NIF3L1-209ENST00000454952 ANKHD1Q8IWZ3 2542 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 AKAP6Q13023 2319 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ITPR3Q14573 2671 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 LRIT2A6NDA9 550 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ANKDD1BA6NHY2 528 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 FAM166BA8MTA8 275 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ERI3O43414 337 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 HCN1O60741 890 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 CTNSO60931 367 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 FAM155BO75949 473 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 GLSO94925 669 aaPredicted RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 B3GALT4O96024 378 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNF37AP17032 561 aaPredicted RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 TNNI3P19429 210 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 MAN2A2P49641 1150 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 GPR143P51810 404 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 MTTPP55157 894 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 BIKQ13323 160 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 FRG1Q14331 258 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC10A1Q14973 349 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 PPP1R3AQ16821 1122 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 HYAL4Q2M3T9 481 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 EMC4Q5J8M3 183 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 TEDDM1Q5T9Z0 273 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNF585AQ6P3V2 769 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ARSKQ6UWY0 536 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 IL20RBQ6UXL0 311 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 FAM47EQ6ZV65 393 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 TRILQ7L0X0 811 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 CCDC71Q8IV32 467 aaPredicted RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 AGGF1Q8N302 714 aaeCLIP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 OR2L5Q8NG80 312 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 CCT6BQ92526 530 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 LRRC39Q96DD0 335 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 MS4A6EQ96DS6 147 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 RASL10BQ96S79 203 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 REXO4Q9GZR2 422 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 CXXC4Q9H2H0 198 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 SPNS1Q9H2V7 528 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 LDAHQ9H6V9 325 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 EXO5Q9H790 373 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 LYRM4Q9HD34 91 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 PNPLA3Q9NST1 481 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 DNAJB12Q9NXW2 375 aaKnown RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 NSMCE4AQ9NXX6 385 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 VTI1BQ9UEU0 232 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ASIC3Q9UHC3 531 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 ZNF223Q9UK11 482 aaPredicted RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 BOKQ9UMX3 212 aaPredicted RBP7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 OARD1Q9Y530 152 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 HRH3Q9Y5N1 445 aa7.44□□□□□ -1.22
NIF3L1-209ENST00000454952 HSPB2A8KAH6 182 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 WWP2O00308 870 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 DNALI1O14645 258 aaPredicted RBP7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 CLGNO14967 610 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 CTAG2O75638 210 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 WDR47O94967 919 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 OR6B1O95007 311 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 GLI4P10075 376 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 FOSL1P15407 271 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 DNASE1P24855 282 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 HNRNPH1P31943 449 aaKnown RBP7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 SOX3P41225 446 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 KIR2DL3P43628 341 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 KCNC1P48547 511 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 HK2P52789 917 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 IST1P53990 364 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 SLC12A2P55011 1212 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 LAPTM5Q13571 262 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 RUNX2Q13950 521 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 SLBPQ14493 270 aaKnown RBP eCLIP7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 MORF4L2Q15014 288 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 SF3B4Q15427 424 aaKnown RBP eCLIP7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 HSPB2Q16082 182 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 HIST2H2ACQ16777 129 aaPredicted RBP7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 MPEG1Q2M385 716 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 ADPRMQ3LIE5 342 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 XKR6Q5GH73 641 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 PAGE2BQ5JRK9 111 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 CDKL4Q5MAI5 379 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 C1orf185Q5T7R7 199 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 RIPPLY2Q5TAB7 128 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 HIST2H2AA3Q6FI13 130 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 SLCO4C1Q6ZQN7 724 aa7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 SYDE1Q6ZW31 735 aaPredicted RBP7.43□□□□□ -1.22
NIF3L1-209ENST00000454952 CAMKMTQ7Z624 323 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms