RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ZNF404Q494X3 552 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 ZNF658BQ4V348 819 aaPredicted RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 FAM71E1Q6IPT2 247 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 LCTLQ6UWM7 567 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 PLEKHG7Q6ZR37 379 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 Q6ZVL8 140 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 AHSA2Q719I0 299 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 SLC46A3Q7Z3Q1 461 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 ADIPOR2Q86V24 386 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 FAM124AQ86V42 546 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 SLC44A2Q8IWA5 706 aaPredicted RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 HS6ST3Q8IZP7 471 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 ZNF687Q8N1G0 1237 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 KRT78Q8N1N4 520 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 CHST14Q8NCH0 376 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 OR9A1PQ8NGU1 263 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 MCFD2Q8NI22 146 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 SPPL2AQ8TCT8 520 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 APH1BQ8WW43 257 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 MED8Q96G25 268 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 ZSWIM3Q96MP5 696 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 CNTNAP3BQ96NU0 1288 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 QRFPRQ96P65 431 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 OR4K3Q96R72 315 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 MTERF1Q99551 399 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 PKP4Q99569 1192 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 NEURL2Q9BR09 285 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 SLC35A5Q9BS91 424 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 CNTNAP3Q9BZ76 1288 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 ABCG8Q9H221 673 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 DSN1Q9H410 356 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 DMRT3Q9NQL9 472 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 SELENONQ9NZV5 590 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 NDUFAF4Q9P032 175 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 SH3BP4Q9P0V3 963 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 CDV3Q9UKY7 258 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 GPR34Q9UPC5 381 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 WDR37Q9Y2I8 494 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 TDRKHQ9Y2W6 561 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 FAM32AQ9Y421 112 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 DGKBQ9Y6T7 804 aa10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 MAP1BP46821 2468 aaKnown RBP10.11□□□□□ -0.79
GTF3C2-206ENST00000454704 KMT2BQ9UMN6 2715 aaPredicted RBP10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 METTL15A6NJ78 407 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 FADS2P1A8MWK0 482 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TTC34A8MYJ7 566 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 NEDD8-MDP1E9PL57 170 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 VEGFDO43915 354 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 BNIP3LO60238 219 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 CNOT3O75175 753 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 LEFTY1O75610 366 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 SNX4O95219 450 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 SLC16A8O95907 504 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 PRNPP04156 253 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TFPTP0C1Z6 253 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 ELFN1P0C7U0 828 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TDGF1P13385 188 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TYRP14679 529 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 UQCRC2P22695 453 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 ETV6P41212 452 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 MAP2K4P45985 399 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 XCR1P46094 333 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 LIMS1P48059 325 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 PRIM2P49643 509 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 MVDP53602 400 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 PCBP3P57721 371 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 SMIM11AP58511 58 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 RPS13P62277 151 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TBPL1P62380 186 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 CDK6Q00534 326 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 SPIBQ01892 262 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 EEF1A2Q05639 463 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 DPTQ07507 201 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 RPA4Q13156 261 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 GAB1Q13480 694 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 IRF3Q14653 427 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 ARHGAP19Q14CB8 494 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 LPAL2Q16609 132 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 MEDAGQ5VYS4 303 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 RNLSQ5VYX0 342 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 VITQ6UXI7 678 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 LIPIQ6XZB0 460 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 GDPGP1Q6ZNW5 385 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 RFLNAQ6ZTI6 216 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 TRIM69Q86WT6 500 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 LGI4Q8N135 537 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 LINC00471Q8N535 108 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 RASGEF1AQ8N9B8 481 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 IL17RCQ8NAC3 791 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 CDC26Q8NHZ8 85 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 PSMA8Q8TAA3 256 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 NDNFQ8TB73 568 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 SLC5A11Q8WWX8 675 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 SMARCD2Q92925 531 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 AP2M1Q96CW1 435 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 DTD2Q96FN9 168 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 MRGPRX3Q96LB0 322 aa10.1□□□□□ -0.79
GTF3C2-206ENST00000454704 Q96MT0 163 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms