RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SLC2A12Q8TD20 617 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MAGOHBQ96A72 148 aaKnown RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ESAMQ96AP7 390 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MS4A6EQ96DS6 147 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CERS2Q96G23 380 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SIGLEC10Q96LC7 697 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GAL3ST4Q96RP7 486 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EGFL8Q99944 293 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FOXC2Q99958 501 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AIF1LQ9BQI0 150 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCDC77Q9BR77 488 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CXXC4Q9H2H0 198 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRM3Q9NNZ6 103 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ADAP2Q9NPF8 381 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KLHL42Q9P2K6 505 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MYOTQ9UBF9 498 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ACAD8Q9UKU7 415 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CBLCQ9ULV8 474 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RPH3AQ9Y2J0 694 aaPredicted RBP5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 DYRK1BQ9Y463 629 aa5.54□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PRR14LQ5THK1 2151 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HIVEP2P31629 2446 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C15orf38-AP3S2A0A0A6YYH1 394 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 A0A1W2PS29 197 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FOXO6A8MYZ6 492 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 C17orf105B2RV13 164 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EEF1E1-BLOC1S5C9J1V9 151 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AP3B1O00203 1094 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EIF3FO00303 357 aaPredicted RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLGNO14967 610 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 EEF1E1O43324 174 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 B3GALT2O43825 422 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FGF17O60258 216 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZFAND5O76080 213 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ETHE1O95571 254 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AHSGP02765 367 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SERPINA6P08185 405 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HIST1H2AGP0C0S8 130 aaPredicted RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SMIM10L1P0DMW3 83 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HIST1H2ADP20671 130 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PTMSP20962 102 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 IL10P22301 178 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TCEA1P23193 301 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 AHRP35869 848 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KIR2DL3P43628 341 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ZFP36L2P47974 494 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MAN2A2P49641 1150 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LIM2P55344 173 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RAB38P57729 211 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 IL2P60568 153 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SKP1P63208 163 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KCNJ2P63252 427 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SARNPP82979 210 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LTBQ06643 244 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TERF2Q15554 542 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ELAVL1Q15717 326 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 NNATQ16517 81 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RNASEH2BQ5TBB1 312 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CES4AQ5XG92 561 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FBXW10Q5XX13 1052 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM198Q66K66 360 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM211Q6ICI0 200 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LRRC8EQ6NSJ5 796 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CCDC137Q6PK04 289 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ARSKQ6UWY0 536 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HSDL2Q6YN16 418 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SLCO4C1Q6ZQN7 724 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RTL4Q6ZR62 310 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 KIAA0408Q6ZU52 694 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ACAD11Q709F0 780 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FRA10AC1Q70Z53 315 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 STRA8Q7Z7C7 330 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ANKMY2Q8IV38 441 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CLYBLQ8N0X4 340 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TXLNBQ8N3L3 684 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 RNF10Q8N5U6 811 aaKnown RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SNX31Q8N9S9 440 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM13CQ8NE31 585 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CHDHQ8NE62 594 aaPredicted RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TNIP2Q8NFZ5 429 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CALML6Q8TD86 181 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PTPMT1Q8WUK0 201 aaPredicted RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 ANKRD49Q8WVL7 239 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 GAL3ST3Q96A11 431 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SMIM10Q96HG1 83 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAR2Q96K12 515 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HIST1H2AHQ96KK5 128 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 QRFPRQ96P65 431 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 F2RL3Q96RI0 385 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 HIST1H2AJQ99878 128 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SH3GL2Q99962 352 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 MAPKAP1Q9BPZ7 522 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 FAM173AQ9BQD7 235 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 TMEM79Q9BSE2 394 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 H2AFJQ9BTM1 129 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 SARGQ9BW04 601 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 LDAHQ9H6V9 325 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 COPS7BQ9H9Q2 264 aaPredicted RBP5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 CAB39LQ9H9S4 337 aa5.53□□□□□ -1.52
HLA-DPA3-207ENST00000454398 PELI2Q9HAT8 420 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms