RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 MYO1DO94832 1006 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 CLDN9O95484 217 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 EDN3P14138 238 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 CD96P40200 585 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ST13P50502 369 aaKnown RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 TDGF1P3P51864 188 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 SLC13A2Q13183 592 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 CUL3Q13618 768 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 GGTA1PQ4G0N0 100 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 FHL5Q5TD97 284 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 MRM1Q6IN84 353 aaKnown RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 FAM180AQ6UWF9 173 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 CLNKQ7Z7G1 428 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 LCA5Q86VQ0 697 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 RPS19BP1Q86WX3 136 aaKnown RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ZCCHC7Q8N3Z6 543 aaKnown RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 BCORP1Q8N888 145 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF483Q8TF39 744 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 RGMAQ96B86 450 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ANKRD9Q96BM1 317 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 REPS1Q96D71 796 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 TRIM45Q9H8W5 580 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 PNO1Q9NRX1 252 aaKnown RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 PSMC3IPQ9P2W1 217 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-207ENST00000453796 VTI1BQ9UEU0 232 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 EML6Q6ZMW3 1958 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 HECTD1Q9ULT8 2610 aa13.6□□□□□ -0.23
HSPG2-207ENST00000453796 IQANK1A0A1B0GTG1 560 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 A0A1B0GTL3 188 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 BLACEA4D250 179 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 LDB3O75112 727 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 NEURL1O76050 574 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 PTX3P26022 381 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 TPP2P29144 1249 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 BSGP35613 385 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 NEK2P51955 445 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 CCNG1P51959 295 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 HNRNPH2P55795 449 aaKnown RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 MLF1P58340 268 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 IGLV3-21P80748 117 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ELAVL1Q15717 326 aaKnown RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF766Q5HY98 468 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF468Q5VIY5 522 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF227Q86WZ6 799 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 SUN3Q8TAQ9 357 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 PRR7Q8TB68 274 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ACMSDQ8TDX5 336 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 PTPMT1Q8WUK0 201 aaPredicted RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 NR4A3Q92570 626 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 SCMH1Q96GD3 660 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 PSMG3-AS1Q96PY0 264 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ALOXE3Q9BYJ1 711 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 DDX31Q9H8H2 851 aaKnown RBP13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ABI3Q9P2A4 366 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 ZNF225Q9UK10 706 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 FBXW2Q9UKT8 454 aa13.59□□□□□ -0.23
HSPG2-207ENST00000453796 USP9YO00507 2555 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-207ENST00000453796 A0A0A6YYD5 115 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 TRBV11-1A0A0K0K1C0 115 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 MYOCOSA0A1B0GUC4 107 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 TMEM200CA6NKL6 621 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 PPP6CO00743 305 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 PRKNO60260 465 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-207ENST00000453796 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
HSPG2-207ENST00000453796 RASAL1O95294 804 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 SHBGP04278 402 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 RNF224P0DH78 156 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 CPN2P22792 545 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 TRHRP34981 398 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-207ENST00000453796 CLCN2P51788 898 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 RAP1GDS1P52306 607 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 PHEXP78562 749 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 SLAMF1Q13291 335 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 SERTAD2Q14140 314 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 OR1C1Q15619 314 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 SPINK14Q6IE38 97 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 SH2D5Q6ZV89 423 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 CNPY4Q8N129 248 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 OR4F6Q8NGB9 312 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 NCLNQ969V3 563 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 ATP6V1E2Q96A05 226 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 UTP23Q9BRU9 249 aaKnown RBP13.58□□□□□ -0.24
HSPG2-207ENST00000453796 CENPKQ9BS16 269 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 HES7Q9BYE0 225 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 DEFB126Q9BYW3 111 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 ANKZF1Q9H8Y5 726 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 SEMA4BQ9NPR2 832 aaPredicted RBP13.58□□□□□ -0.24
HSPG2-207ENST00000453796 OLAHQ9NV23 265 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 MS4A12Q9NXJ0 267 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 ANKRD10Q9NXR5 420 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 ATG4BQ9Y4P1 393 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 ASB4Q9Y574 426 aa13.58□□□□□ -0.24
HSPG2-207ENST00000453796 PROM1O43490 865 aa13.57□□□□□ -0.24
HSPG2-207ENST00000453796 TMPRSS11DO60235 418 aa13.57□□□□□ -0.24
HSPG2-207ENST00000453796 FGF17O60258 216 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms